gnu: texlive-latex-base: Declare a source file-name.
[jackhill/guix/guix.git] / gnu / local.mk
index 72fbf90..5a3ae50 100644 (file)
@@ -7,7 +7,7 @@
 # Copyright © 2016, 2017, 2018 Kei Kebreau <kkebreau@posteo.net>
 # Copyright © 2016, 2017 Rene Saavedra <rennes@openmailbox.org>
 # Copyright © 2016 Adonay "adfeno" Felipe Nogueira <https://libreplanet.org/wiki/User:Adfeno> <adfeno@openmailbox.org>
-# Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
+# Copyright © 2016, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
 # Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>
 # Copyright © 2016, 2017, 2018 Alex Vong <alexvong1995@gmail.com>
 # Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
@@ -76,6 +76,7 @@ GNU_SYSTEM_MODULES =                          \
   %D%/packages/bash.scm                                \
   %D%/packages/bdw-gc.scm                      \
   %D%/packages/benchmark.scm                   \
+  %D%/packages/bioconductor.scm                        \
   %D%/packages/bioinformatics.scm              \
   %D%/packages/bittorrent.scm                  \
   %D%/packages/bison.scm                       \
@@ -119,6 +120,7 @@ GNU_SYSTEM_MODULES =                                \
   %D%/packages/datastructures.scm              \
   %D%/packages/dav.scm                         \
   %D%/packages/dc.scm                          \
+  %D%/packages/debian.scm                      \
   %D%/packages/debug.scm                       \
   %D%/packages/dejagnu.scm                     \
   %D%/packages/dico.scm                                \
@@ -280,6 +282,7 @@ GNU_SYSTEM_MODULES =                                \
   %D%/packages/marst.scm                       \
   %D%/packages/mate.scm             \
   %D%/packages/maths.scm                       \
+  %D%/packages/maven.scm                       \
   %D%/packages/mc.scm                          \
   %D%/packages/mcrypt.scm                      \
   %D%/packages/medical.scm                     \
@@ -454,6 +457,7 @@ GNU_SYSTEM_MODULES =                                \
   %D%/services/avahi.scm                       \
   %D%/services/base.scm                                \
   %D%/services/certbot.scm                     \
+  %D%/services/cgit.scm                        \
   %D%/services/configuration.scm               \
   %D%/services/cuirass.scm                     \
   %D%/services/cups.scm                                \
@@ -551,6 +555,8 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/agg-am_c_prototype.patch                        \
   %D%/packages/patches/ansible-wrap-program-hack.patch         \
   %D%/packages/patches/antiword-CVE-2014-8123.patch                    \
+  %D%/packages/patches/antlr3-3_1-fix-java8-compilation.patch  \
+  %D%/packages/patches/antlr3-3_3-fix-java8-compilation.patch  \
   %D%/packages/patches/ao-cad-aarch64-support.patch            \
   %D%/packages/patches/apr-skip-getservbyname-test.patch       \
   %D%/packages/patches/aspell-default-dict-dir.patch           \
@@ -577,7 +583,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/cdparanoia-fpic.patch                   \
   %D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch     \
   %D%/packages/patches/ceph-disable-cpu-optimizations.patch    \
-  %D%/packages/patches/ceph-disable-unittest-throttle.patch    \
+  %D%/packages/patches/ceph-rocksdb-compat.patch               \
   %D%/packages/patches/ceph-skip-collect-sys-info-test.patch   \
   %D%/packages/patches/ceph-skip-unittest_blockdev.patch       \
   %D%/packages/patches/chmlib-inttypes.patch                   \
@@ -609,7 +615,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/cursynth-wave-rand.patch                        \
   %D%/packages/patches/cvs-2017-12836.patch                    \
   %D%/packages/patches/cyrus-sasl-CVE-2013-4122.patch          \
-  %D%/packages/patches/dblatex-remove-multirow.patch           \
   %D%/packages/patches/dbus-helper-search-path.patch           \
   %D%/packages/patches/deja-dup-use-ref-keyword-for-iter.patch \
   %D%/packages/patches/dfu-programmer-fix-libusb.patch         \
@@ -618,7 +623,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/docbook-xsl-nonrecursive-string-subst.patch     \
   %D%/packages/patches/doc++-include-directives.patch          \
   %D%/packages/patches/doc++-segfault-fix.patch                        \
-  %D%/packages/patches/dovecot-CVE-2017-15132.patch            \
   %D%/packages/patches/doxygen-test.patch                      \
   %D%/packages/patches/dvd+rw-tools-add-include.patch          \
   %D%/packages/patches/eigen-arm-neon-fixes.patch              \
@@ -682,6 +686,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/gcc-6-source-date-epoch-2.patch         \
   %D%/packages/patches/gcr-disable-failing-tests.patch         \
   %D%/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch      \
+  %D%/packages/patches/gd-CVE-2018-5711.patch                  \
   %D%/packages/patches/gd-fix-tests-on-i686.patch              \
   %D%/packages/patches/gd-freetype-test-failure.patch          \
   %D%/packages/patches/gegl-CVE-2012-4433.patch                        \
@@ -709,6 +714,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/glibc-CVE-2017-1000366-pt1.patch                \
   %D%/packages/patches/glibc-CVE-2017-1000366-pt2.patch                \
   %D%/packages/patches/glibc-CVE-2017-1000366-pt3.patch                \
+  %D%/packages/patches/glibc-allow-kernel-2.6.32.patch         \
   %D%/packages/patches/glibc-bootstrap-system.patch            \
   %D%/packages/patches/glibc-ldd-x86_64.patch                  \
   %D%/packages/patches/glibc-locales.patch                     \
@@ -773,10 +779,6 @@ dist_patch_DATA =                                          \
   %D%/packages/patches/hwloc-tests-without-sysfs.patch         \
   %D%/packages/patches/hydra-disable-darcs-test.patch          \
   %D%/packages/patches/icecat-avoid-bundled-libraries.patch    \
-  %D%/packages/patches/icecat-bug-1348660-pt5.patch            \
-  %D%/packages/patches/icecat-bug-1415133.patch                        \
-  %D%/packages/patches/icecat-bug-1414945.patch                        \
-  %D%/packages/patches/icecat-bug-1424373-pt2.patch            \
   %D%/packages/patches/icecat-use-system-graphite2.patch       \
   %D%/packages/patches/icecat-use-system-harfbuzz.patch                \
   %D%/packages/patches/id3lib-CVE-2007-4460.patch                      \
@@ -784,6 +786,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/intltool-perl-compatibility.patch       \
   %D%/packages/patches/isl-0.11.1-aarch64-support.patch        \
   %D%/packages/patches/jacal-fix-texinfo.patch                 \
+  %D%/packages/patches/java-jeromq-fix-tests.patch             \
   %D%/packages/patches/java-powermock-fix-java-files.patch             \
   %D%/packages/patches/java-xerces-bootclasspath.patch \
   %D%/packages/patches/java-xerces-build_dont_unzip.patch      \
@@ -883,6 +886,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/llvm-3.5-fix-clang-build-with-gcc5.patch        \
   %D%/packages/patches/llvm-for-extempore.patch                        \
   %D%/packages/patches/lm-sensors-hwmon-attrs.patch            \
+  %D%/packages/patches/lrzip-CVE-2017-8842.patch               \
   %D%/packages/patches/lua-CVE-2014-5461.patch                      \
   %D%/packages/patches/lua-pkgconfig.patch                      \
   %D%/packages/patches/lua51-liblua-so.patch                    \
@@ -972,7 +976,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch     \
   %D%/packages/patches/perl-deterministic-ordering.patch       \
   %D%/packages/patches/perl-finance-quote-unuse-mozilla-ca.patch \
-  %D%/packages/patches/perl-gd-options-passthrough-and-fontconfig.patch \
   %D%/packages/patches/perl-io-socket-ssl-openssl-1.0.2f-fix.patch \
   %D%/packages/patches/perl-net-amazon-s3-moose-warning.patch  \
   %D%/packages/patches/perl-net-dns-resolver-programmable-fix.patch    \
@@ -1037,6 +1040,7 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/python-scikit-learn-fix-test-non-determinism.patch      \
   %D%/packages/patches/python-configobj-setuptools.patch       \
   %D%/packages/patches/python-faker-fix-build-32bit.patch      \
+  %D%/packages/patches/python-mox3-python3.6-compat.patch      \
   %D%/packages/patches/python-paste-remove-website-test.patch  \
   %D%/packages/patches/python-paste-remove-timing-test.patch   \
   %D%/packages/patches/python-pygit2-disable-network-tests.patch       \
@@ -1142,6 +1146,7 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/vsearch-unbundle-cityhash.patch         \
   %D%/packages/patches/vte-CVE-2012-2738-pt1.patch                     \
   %D%/packages/patches/vte-CVE-2012-2738-pt2.patch                     \
+  %D%/packages/patches/wavpack-CVE-2018-6767.patch             \
   %D%/packages/patches/wavpack-CVE-2018-7253.patch             \
   %D%/packages/patches/wavpack-CVE-2018-7254.patch             \
   %D%/packages/patches/weechat-python.patch                    \
@@ -1179,7 +1184,9 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/xinetd-CVE-2013-4342.patch              \
   %D%/packages/patches/xmodmap-asprintf.patch                  \
   %D%/packages/patches/libyaml-CVE-2014-9130.patch             \
-  %D%/packages/patches/zathura-plugindir-environment-variable.patch
+  %D%/packages/patches/zathura-plugindir-environment-variable.patch    \
+  %D%/packages/patches/zsh-CVE-2018-7548.patch                 \
+  %D%/packages/patches/zsh-CVE-2018-7549.patch
 
 MISC_DISTRO_FILES =                            \
   %D%/packages/ld-wrapper.in