;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2018 Lprndn <guix@lprndn.info>
-;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2019, 2021 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
+;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
+;;; Copyright © 2020 Brendan Tildesley <mail@brendan.scot>
+;;; Copyright © 2021 Oleh Malyi <astroclubzp@gmail.com>
+;;; Copyright © 2021 Felix Gruber <felgru@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
#:use-module (guix utils)
#:use-module (guix download)
#:use-module (guix git-download)
+ #:use-module (guix build-system qt)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (gnu packages)
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages curl)
+ #:use-module (gnu packages docbook)
#:use-module (gnu packages documentation)
#:use-module (gnu packages flex)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages qt)
#:use-module (gnu packages serialization)
+ #:use-module (gnu packages sqlite)
#:use-module (gnu packages tbb)
#:use-module (gnu packages tls)
+ #:use-module (gnu packages version-control)
#:use-module (gnu packages video)
#:use-module (gnu packages xiph)
#:use-module (gnu packages xml)
of external libraries that provide additional functionality.")
(license license:gpl3+)))
+(define-public opencolorio
+ (package
+ (name "opencolorio")
+ (version "1.1.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/AcademySoftwareFoundation/OpenColorIO")
+ (commit (string-append "v" version))))
+ (sha256
+ (base32 "12srvxca51czpfjl0gabpidj9n84mw78ivxy5w75qhq2mmc798sb"))
+ (file-name (git-file-name name version))
+ (modules '((guix build utils)))
+ (snippet
+ `(begin
+ ;; Remove bundled tarballs, patches, and .jars(!). XXX: Upstream
+ ;; claims to have fixed USE_EXTERNAL_YAML, but it still fails with:
+ ;; https://github.com/AcademySoftwareFoundation/OpenColorIO/issues/517
+ ;; When removing it, also remove it from the licence field comment.
+ (for-each delete-file-recursively
+ (filter
+ (lambda (full-name)
+ (let ((file (basename full-name)))
+ (not (or (string-prefix? "yaml-cpp-0.3" file)
+ (string=? "unittest.h" file)))))
+ (find-files "ext" ".*")))
+
+ #t))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:configure-flags
+ (list (string-append "-DCMAKE_CXX_FLAGS="
+ "-Wno-error=deprecated-declarations "
+ "-Wno-error=unused-function")
+ "-DOCIO_BUILD_STATIC=OFF"
+ ;; "-DUSE_EXTERNAL_YAML=ON"
+ "-DUSE_EXTERNAL_TINYXML=ON"
+ "-DUSE_EXTERNAL_LCMS=ON")
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-test-suite
+ (lambda _
+ (substitute* "src/core_tests/CMakeLists.txt"
+ (("/bin/sh") (which "bash")))
+ #t)))))
+ (native-inputs
+ `(("git" ,git)
+ ("pkg-config" ,pkg-config)))
+ (inputs
+ ;; XXX Adding freeglut, glew, ilmbase, mesa, and openimageio for
+ ;; ocioconvert fails: error: conflicting declaration ?typedef void
+ ;; (* PFNGLGETFRAGMENTMATERIALFVSGIXPROC)(GLenum, GLenum, GLfloat*)
+ `(("lcms" ,lcms)
+ ("openexr" ,openexr)
+ ("tinyxml" ,tinyxml)))
+ (home-page "https://opencolorio.org")
+ (synopsis "Color management for visual effects and animation")
+ (description
+ "OpenColorIO, or OCIO, is a complete color management solution geared
+towards motion picture production, with an emphasis on visual effects and
+computer animation. It provides a straightforward and consistent user
+experience across all supporting applications while allowing for sophisticated
+back-end configuration options suitable for high-end production usage.
+
+OCIO is compatible with the @acronym{ACES, Academy Color Encoding
+Specification} and is @acronym{LUT, look-up table}-format agnostic, supporting
+many popular formats.")
+ (license (list license:expat ; docs/ociotheme/static, ext/yaml-cpp-*
+ license:zlib ; src/core/md5
+ license:bsd-3)))) ; the rest
+
(define-public vtk
(package
(name "vtk")
"/VTK-" version ".tar.gz"))
(sha256
(base32
- "1fspgp8k0myr6p2a6wkc21ldcswb4bvmb484m12mxgk1a9vxrhrl"))))
+ "1fspgp8k0myr6p2a6wkc21ldcswb4bvmb484m12mxgk1a9vxrhrl"))
+ (patches
+ (search-patches "vtk-fix-freetypetools-build-failure.patch"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ (for-each
+ (lambda (dir)
+ (delete-file-recursively
+ (string-append "ThirdParty/" dir "/vtk" dir)))
+ ;; ogg, pugixml depended upon unconditionally
+ '("doubleconversion" "eigen" "expat" "freetype" "gl2ps"
+ "glew" "hdf5" "jpeg" "jsoncpp" "libproj" "libxml2" "lz4"
+ "netcdf" "png" "sqlite" "theora" "tiff" "zlib"))
+ #t))))
(build-system cmake-build-system)
(arguments
'(#:build-type "Release" ;Build without '-g' to save space.
- ;; -DVTK_USE_SYSTEM_NETCDF:BOOL=TRUE requires netcdf_cxx
- #:configure-flags '("-DVTK_USE_SYSTEM_EXPAT:BOOL=TRUE"
+ #:configure-flags '(;"-DBUILD_TESTING:BOOL=TRUE"
+ ;"-DVTK_MODULE_USE_EXTERNAL_vtkogg:BOOL=TRUE" ; not honored
+ "-DVTK_USE_SYSTEM_DOUBLECONVERSION:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_EIGEN:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_EXPAT:BOOL=TRUE"
"-DVTK_USE_SYSTEM_FREETYPE:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_GL2PS:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_GLEW:BOOL=TRUE"
"-DVTK_USE_SYSTEM_HDF5:BOOL=TRUE"
"-DVTK_USE_SYSTEM_JPEG:BOOL=TRUE"
"-DVTK_USE_SYSTEM_JSONCPP:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_LIBPROJ:BOOL=TRUE"
"-DVTK_USE_SYSTEM_LIBXML2:BOOL=TRUE"
- "-DVTK_USE_SYSTEM_OGGTHEORA:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_LZ4:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_NETCDF:BOOL=TRUE"
"-DVTK_USE_SYSTEM_PNG:BOOL=TRUE"
+ ;"-DVTK_USE_SYSTEM_PUGIXML:BOOL=TRUE" ; breaks IO/CityGML
+ "-DVTK_USE_SYSTEM_SQLITE:BOOL=TRUE"
+ "-DVTK_USE_SYSTEM_THEORA:BOOL=TRUE"
"-DVTK_USE_SYSTEM_TIFF:BOOL=TRUE"
"-DVTK_USE_SYSTEM_ZLIB:BOOL=TRUE")
- #:tests? #f)) ;XXX: no "test" target
+ #:tests? #f)) ;XXX: test data not included
(inputs
- `(("libXt" ,libxt)
- ("xorgproto" ,xorgproto)
- ("libX11" ,libx11)
- ("libxml2" ,libxml2)
- ("mesa" ,mesa)
- ("glu" ,glu)
+ `(("double-conversion" ,double-conversion)
+ ("eigen" ,eigen)
("expat" ,expat)
("freetype" ,freetype)
+ ("gl2ps" ,gl2ps)
+ ("glew" ,glew)
+ ("glu" ,glu)
("hdf5" ,hdf5)
("jpeg" ,libjpeg-turbo)
("jsoncpp" ,jsoncpp)
- ("libogg" ,libogg)
+ ;("libogg" ,libogg)
("libtheora" ,libtheora)
+ ("libX11" ,libx11)
+ ("libxml2" ,libxml2)
+ ("libXt" ,libxt)
+ ("lz4" ,lz4)
+ ("mesa" ,mesa)
+ ("netcdf" ,netcdf)
("png" ,libpng)
+ ("proj" ,proj.4)
+ ;("pugixml" ,pugixml)
+ ("sqlite" ,sqlite)
("tiff" ,libtiff)
+ ("xorgproto" ,xorgproto)
("zlib" ,zlib)))
(home-page "https://vtk.org/")
(synopsis "Libraries for 3D computer graphics")
(sha256
(base32
"06bc61r8myym4s8im10brdjfg4wxkrvsbhhl7vr1msdan2xddzi3"))
+ (patches
+ (search-patches "opencv-fix-build-of-grfmt_jpeg2000.cpp.patch"))
(modules '((guix build utils)))
(snippet
'(begin
(define-public vips
(package
(name "vips")
- (version "8.7.4")
+ (version "8.10.5")
(source
(origin
(method url-fetch)
"https://github.com/libvips/libvips/releases/download/v"
version "/vips-" version ".tar.gz"))
(sha256
- (base32 "01gjhcrl6zj7mcj1al717v5jsniahplqhz1xkfh2j78vyfl1hxff"))))
+ (base32 "1n6gw7cw66rfn1wdb92ydpkv7gfmjiinsg6d6gqxpdja6gsz5vm4"))))
(build-system gnu-build-system)
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("gobject-introspection" ,gobject-introspection)))
+ `(("gobject-introspection" ,gobject-introspection)
+ ("pkg-config" ,pkg-config)))
(inputs
- `(("glib" ,glib)
+ `(("expat" ,expat)
+ ("fftw" ,fftw)
+ ("giflib" ,giflib)
+ ("glib" ,glib)
+ ("hdf5" ,hdf5)
+ ("imagemagick" ,imagemagick)
+ ("lcms" ,lcms)
+ ("libexif" ,libexif)
+ ("libgsf" ,libgsf)
("libjpeg" ,libjpeg-turbo)
("libpng" ,libpng)
("librsvg" ,librsvg)
("libtiff" ,libtiff)
- ("libexif" ,libexif)
- ("giflib" ,giflib)
- ("libgsf" ,libgsf)
- ("fftw" ,fftw)
- ("poppler" ,poppler)
- ("pango" ,pango)
- ("lcms" ,lcms)
- ("matio" ,matio)
+ ("libxml2" ,libxml2)
("libwebp" ,libwebp)
+ ("matio" ,matio)
("niftilib" ,niftilib)
("openexr" ,openexr)
("orc" ,orc)
- ("imagemagick" ,imagemagick)
- ("libxml2" ,libxml2)
- ("expat" ,expat)
- ("hdf5" ,hdf5)))
+ ("pango" ,pango)
+ ("poppler" ,poppler)))
(home-page "https://libvips.github.io/libvips/")
(synopsis "Multithreaded image processing system with low memory needs")
(description
due to its architecture which automatically parallelises the image workflows.")
(license license:lgpl2.1+)))
+(define-public gmic
+ (package
+ (name "gmic")
+ (version "2.9.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://gmic.eu/files/source/gmic_"
+ version ".tar.gz"))
+ (sha256
+ (base32 "06n1dcskky7aqg3a0cp7biwz8agc4xqvr8091l2wsvgib98yhbyj"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:tests? #f ;there are no tests
+ #:configure-flags '("-DBUILD_LIB_STATIC=OFF"
+ "-DENABLE_DYNAMIC_LINKING=ON"
+ "-DENABLE_LTO=ON")
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'set-LDFLAGS
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (setenv "LDFLAGS"
+ (string-append
+ "-Wl,-rpath="
+ (assoc-ref outputs "out") "/lib")))))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (inputs
+ `(("curl" ,curl)
+ ("fftw" ,fftw)
+ ("graphicsmagick" ,graphicsmagick)
+ ("libjpeg-turbo" ,libjpeg-turbo)
+ ("libpng" ,libpng)
+ ("libtiff" ,libtiff)
+ ("libx11" ,libx11)
+ ;;("opencv" ,opencv) ;OpenCV is currently broken in the CI
+ ("openexr" ,openexr)
+ ("zlib" ,zlib)))
+ (home-page "https://gmic.eu/")
+ (synopsis "Full-featured framework for digital image processing")
+ (description "G'MIC is a full-featured framework for digital image
+processing. It provides several user interfaces to convert / manipulate
+/ filter / visualize generic image datasets, ranging from 1D scalar
+signals to 3D+t sequences of multi-spectral volumetric images, hence
+including 2D color images.")
+ ;; Dual-licensed, either license applies.
+ (license (list license:cecill license:cecill-c))))
+
+(define-public gmic-qt
+ (package
+ (inherit gmic)
+ (name "gmic-qt")
+ (arguments
+ (substitute-keyword-arguments (package-arguments gmic)
+ ((#:configure-flags _)
+ `(list "-DGMIC_QT_HOST=none" "-DENABLE_DYNAMIC_LINKING=ON"
+ (string-append "-DGMIC_LIB_PATH="
+ (assoc-ref %build-inputs "gmic") "/lib")))
+ ((#:phases phases)
+ `(modify-phases ,phases
+ (add-after 'unpack 'qt-chdir
+ (lambda _ (chdir "gmic-qt") #t))))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("qttools" ,qttools)))
+ (inputs
+ `(("gmic" ,gmic)
+ ("qtbase" ,qtbase)
+ ,@(package-inputs gmic)))
+ (synopsis "Qt frontend for the G'MIC image processing framework")
+ (license license:gpl3+)))
+
+(define-public gmic-qt-krita
+ (package
+ (inherit gmic-qt)
+ (name "gmic-qt-krita")
+ (arguments
+ (substitute-keyword-arguments (package-arguments gmic-qt)
+ ((#:configure-flags flags)
+ '(list "-DGMIC_QT_HOST=krita" "-DENABLE_DYNAMIC_LINKING=ON"
+ (string-append "-DGMIC_LIB_PATH="
+ (assoc-ref %build-inputs "gmic") "/lib")))))
+ (synopsis "Krita plugin for the G'MIC image processing framework")))
+
(define-public nip2
(package
(name "nip2")
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/vxl/vxl.git")
+ (url "https://github.com/vxl/vxl")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/vxl/vxl.git")
+ (url "https://github.com/vxl/vxl")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
("vtk" ,vtk-6)
("qtbase" ,qtbase)
("qtdeclarative" ,qtdeclarative)
- ("qttools" ,qttools)
("vxl" ,vxl-1)
("zlib" ,zlib)))
(native-inputs
`(("googletest" ,googletest)
+ ("qttools" ,qttools)
("pkg-config" ,pkg-config)
("c3d-src"
,(let* ((commit "f521358db26e00002c911cc47bf463b043942ad3")
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/pyushkevich/c3d.git")
+ (url "https://github.com/pyushkevich/c3d")
(commit commit)))
(file-name (git-file-name "c3d" version))
(sha256
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/pyushkevich/greedy.git")
+ (url "https://github.com/pyushkevich/greedy")
(commit commit)))
(file-name (git-file-name "greedy" version))
(sha256
full-featured UI aimed at clinical researchers.")
;; This includes the submodules greedy and c3d.
(license license:gpl3+)))
+
+(define-public metapixel
+ ;; Follow stable branch.
+ (let ((commit "98ee9daa093b6c334941242e63f90b1c2876eb4f"))
+ (package
+ (name "metapixel")
+ (version (git-version "1.0.2" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/schani/metapixel")
+ (commit commit)
+ ;; TODO: Package rwimg and lispreader?
+ (recursive? #t)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0r7n3a6bvcxkbpda4mwmrpicii09iql5z69nkjqygkwxw7ny3309"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("giflib" ,giflib)
+ ("libjpeg" ,libjpeg-turbo)
+ ("libpng" ,libpng)
+ ("perl" ,perl)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("docbook-xml" ,docbook-xml)
+ ("docbook-xsl" ,docbook-xsl)
+ ("xsltproc" ,libxslt)))
+ (arguments
+ `(#:tests? #f ; No tests.
+ #:make-flags (list
+ (string-append "PREFIX=" (assoc-ref %outputs "out"))
+ (string-append "MANPAGE_XSL="
+ (assoc-ref %build-inputs "docbook-xsl")
+ "/xml/xsl/docbook-xsl-*/manpages/docbook.xsl"))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-before 'install 'make-local-docbook-xml
+ (lambda* (#:key inputs #:allow-other-keys)
+ (substitute* "metapixel.xml"
+ (("http://www.oasis-open.org/docbook/xml/4.2/docbookx.dtd")
+ (string-append (assoc-ref inputs "docbook-xml")
+ "/xml/dtd/docbook/docbookx.dtd")))
+ #t))
+ (add-before 'install 'fix-directory-creation
+ (lambda* (#:key outputs #:allow-other-keys)
+ (mkdir-p (string-append (assoc-ref outputs "out") "/share/man/man1"))
+ #t)))))
+ (home-page "https://www.complang.tuwien.ac.at/schani/metapixel/")
+ (synopsis "Photomosaics generator")
+ (description "Metapixel is a program for generating photomosaics. It can
+generate classical photomosaics, in which the source image is viewed as a
+matrix of equally sized rectangles for each of which a matching image is
+substituted, as well as collage-style photomosaics, in which rectangular parts
+of the source image at arbitrary positions (i.e. not aligned to a matrix) are
+substituted by matching images.")
+ (license license:gpl2))))
+
+(define-public scantailor-advanced
+ (let ((commit "3d1e74e6ace413733511086934a66f4e3f7a6027"))
+ (package
+ (name "scantailor-advanced")
+ (version (string-append "1.0.16-" (string-take commit 7)))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/4lex4/scantailor-advanced")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0kixwjb2x457dq7927hkh34c803p7yh1pmn6n61rk9shqrcg492h"))))
+ (build-system qt-build-system)
+ (native-inputs
+ `(("qttools" ,qttools)))
+ (inputs
+ `(("boost" ,boost)
+ ("libjpeg" ,libjpeg-turbo)
+ ("libpng" ,libpng)
+ ("libtiff" ,libtiff)
+ ("qtbase" ,qtbase)
+ ("qtsvg" ,qtsvg)
+ ("zlib" ,zlib)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; Some tests require a display and fail with offscreen mode.
+ (add-after 'unpack 'disable-failing-tests
+ (lambda _
+ (setenv "ARGS" "--exclude-regex \"imageproc_.*\"")
+ #t)))))
+ (home-page "https://github.com/4lex4/scantailor-advanced")
+ (synopsis "Clean up scanned pages")
+ (description "Scan Tailor is an interactive post-processing tool for
+scanned pages. It performs operations such as page splitting, deskewing,
+adding/removing borders, and others. You give it raw scans, and you get pages
+ready to be printed or assembled into a PDF or DJVU file. Scanning, optical
+character recognition, and assembling multi-page documents are out of scope of
+this project.
+
+Scan Tailer Advanced is a fork of Scan Tailer that merges Scan Tailor Featured
+and Scan Tailor Enhanced versions as well as including many more bug fixes.")
+ (license license:gpl3+))))
+
+(define-public stiff
+ (package
+ (name "stiff")
+ (version "2.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://www.astromatic.net/download/stiff/stiff-"
+ version ".tar.gz"))
+ (sha256
+ (base32 "14m92dskzw7bwsr64ha4p0mj3ndv13gwcbfic3qxrs3zq5353s7l"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("libtiff" ,libtiff)
+ ("zlib" ,zlib)
+ ("libjpeg-turbo" ,libjpeg-turbo)))
+ (home-page "https://www.astromatic.net/software/stiff")
+ (synopsis "Convert scientific FITS images to TIFF format")
+ (description
+ "STIFF is a program that converts scientific @acronym{FITS, Flexible Image
+Transport System} images to the more popular TIFF format for illustration
+purposes.")
+ (license license:gpl3+)))