gnu/packages/package-management.scm

   1 ;;; GNU Guix --- Functional package management for GNU
   2 ;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
   3 ;;; Copyright © 2015, 2017, 2020 Ricardo Wurmus <rekado@elephly.net>
   4 ;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
   5 ;;; Copyright © 2017, 2018 Oleg Pykhalov <go.wigust@gmail.com>
   6 ;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
   7 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
   8 ;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
   9 ;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
  10 ;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
  11 ;;; Copyright © 2018, 2019 Eric Bavier <bavier@member.fsf.org>
  12 ;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
  13 ;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
  14 ;;; Copyright © 2020 Mathieu Othacehe <m.othacehe@gmail.com>
  15 ;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
  16 ;;; Copyright © 2020 Giacomo Leidi <goodoldpaul@autistici.org>
  17 ;;; Copyright © 2020 Jesse Gibbons <jgibbons2357+guix@gmail.com>
  18 ;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
  19 ;;;
  20 ;;; This file is part of GNU Guix.
  21 ;;;
  22 ;;; GNU Guix is free software; you can redistribute it and/or modify it
  23 ;;; under the terms of the GNU General Public License as published by
  24 ;;; the Free Software Foundation; either version 3 of the License, or (at
  25 ;;; your option) any later version.
  26 ;;;
  27 ;;; GNU Guix is distributed in the hope that it will be useful, but
  28 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
  29 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  30 ;;; GNU General Public License for more details.
  31 ;;;
  32 ;;; You should have received a copy of the GNU General Public License
  33 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
  34
  35 (define-module (gnu packages package-management)
  36   #:use-module (gnu packages)
  37   #:use-module (gnu packages acl)
  38   #:use-module (gnu packages attr)
  39   #:use-module (gnu packages avahi)
  40   #:use-module (gnu packages autotools)
  41   #:use-module (gnu packages backup)
  42   #:use-module (gnu packages base)
  43   #:use-module (gnu packages bash)
  44   #:use-module (gnu packages bdw-gc)
  45   #:use-module (gnu packages bison)
  46   #:use-module (gnu packages boost)
  47   #:use-module (gnu packages bootstrap)          ;for 'bootstrap-guile-origin'
  48   #:use-module (gnu packages check)
  49   #:use-module (gnu packages compression)
  50   #:use-module (gnu packages cpio)
  51   #:use-module (gnu packages crypto)
  52   #:use-module (gnu packages curl)
  53   #:use-module (gnu packages dbm)
  54   #:use-module (gnu packages docbook)
  55   #:use-module (gnu packages file)
  56   #:use-module (gnu packages gettext)
  57   #:use-module (gnu packages glib)
  58   #:use-module (gnu packages gnome)
  59   #:use-module (gnu packages gnupg)
  60   #:use-module (gnu packages graphviz)
  61   #:use-module (gnu packages gtk)
  62   #:use-module (gnu packages guile)
  63   #:use-module (gnu packages guile-xyz)
  64   #:use-module (gnu packages hurd)
  65   #:use-module (gnu packages libedit)
  66   #:use-module (gnu packages linux)
  67   #:use-module (gnu packages lisp)
  68   #:use-module (gnu packages man)
  69   #:use-module (gnu packages nettle)
  70   #:use-module (gnu packages networking)
  71   #:use-module (gnu packages nss)
  72   #:use-module (gnu packages patchutils)
  73   #:use-module (gnu packages perl)
  74   #:use-module (gnu packages perl-check)
  75   #:use-module (gnu packages pkg-config)
  76   #:use-module (gnu packages popt)
  77   #:use-module (gnu packages python)
  78   #:use-module (gnu packages python-web)
  79   #:use-module (gnu packages python-xyz)
  80   #:use-module (gnu packages serialization)
  81   #:use-module (gnu packages sqlite)
  82   #:use-module (gnu packages ssh)
  83   #:use-module (gnu packages texinfo)
  84   #:use-module (gnu packages time)
  85   #:use-module (gnu packages tls)
  86   #:use-module (gnu packages vim)
  87   #:use-module (gnu packages virtualization)
  88   #:use-module (gnu packages web)
  89   #:use-module (gnu packages xml)
  90   #:use-module (gnu packages xorg)
  91   #:use-module (guix build-system glib-or-gtk)
  92   #:use-module (guix build-system gnu)
  93   #:use-module (guix build-system meson)
  94   #:use-module (guix build-system python)
  95   #:use-module (guix download)
  96   #:use-module (guix gexp)
  97   #:use-module (guix git-download)
  98   #:use-module ((guix licenses) #:prefix license:)
  99   #:use-module (guix packages)
 100   #:use-module (guix utils)
 101   #:use-module (ice-9 match)
 102   #:use-module (srfi srfi-1))
 103
 104 (define (boot-guile-uri arch)
 105   "Return the URI for the bootstrap Guile tarball for ARCH."
 106   (cond ((string=? "armhf" arch)
 107          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 108                         arch "-linux"
 109                         "/20150101/guile-2.0.11.tar.xz"))
 110         ((string=? "aarch64" arch)
 111          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 112                         arch "-linux/20170217/guile-2.0.14.tar.xz"))
 113         (else
 114          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 115                         arch "-linux"
 116                         "/20131110/guile-2.0.9.tar.xz"))))
 117
 118 ;; NOTE: The commit IDs used here form a linked list threaded through the git
 119 ;; history. In a phenomenon known as boot-stripping, not only the head of this
 120 ;; list is used, but also a few older versions, when a guix from this package is
 121 ;; used to build something also depending on guix.
 122 ;;
 123 ;; Therefore, if, by accident, you set this package to a non-existent commit ID,
 124 ;; it is insufficient to simply correct it with the latest commit.
 125 ;; Instead, please push one commit that rolls back Guix to before the mistake,
 126 ;; and then another that points to the first one. That way, the faulty commit
 127 ;; won't appear on the linked list.
 128 (define-public guix
 129   ;; Latest version of Guix, which may or may not correspond to a release.
 130   ;; Note: the 'update-guix-package.scm' script expects this definition to
 131   ;; start precisely like this.
 132   (let ((version "1.1.0")
 133         (commit "2f458ad713143f31365b9c80ed1b98999db8de32")
 134         (revision 23))
 135     (package
 136       (name "guix")
 137
 138       (version (if (zero? revision)
 139                    version
 140                    (string-append version "-"
 141                                   (number->string revision)
 142                                   "." (string-take commit 7))))
 143       (source (origin
 144                 (method git-fetch)
 145                 (uri (git-reference
 146                       (url "https://git.savannah.gnu.org/r/guix.git")
 147                       (commit commit)))
 148                 (sha256
 149                  (base32
 150                   "1csf8s37babnq5xcp54wgiwcgn9968ha5p52w10mjb24dr7i1m7w"))
 151                 (file-name (string-append "guix-" version "-checkout"))))
 152       (build-system gnu-build-system)
 153       (arguments
 154        `(#:configure-flags (list
 155                             "--localstatedir=/var"
 156                             "--sysconfdir=/etc"
 157                             (string-append "--with-bash-completion-dir="
 158                                            (assoc-ref %outputs "out")
 159                                            "/etc/bash_completion.d")
 160
 161                             ;; Set 'DOT_USER_PROGRAM' to the empty string so
 162                             ;; we don't keep a reference to Graphviz, whose
 163                             ;; closure is pretty big (too big for the Guix
 164                             ;; system installation image.)
 165                             "ac_cv_path_DOT_USER_PROGRAM=dot"
 166
 167                             ;; To avoid problems with the length of shebangs,
 168                             ;; choose a fixed-width and short directory name
 169                             ;; for tests.
 170                             "ac_cv_guix_test_root=/tmp/guix-tests"
 171                             ,@(if (hurd-target?) '("--with-courage") '()))
 172          #:parallel-tests? #f         ;work around <http://bugs.gnu.org/21097>
 173
 174          #:modules ((guix build gnu-build-system)
 175                     (guix build utils)
 176                     (srfi srfi-26)
 177                     (ice-9 popen)
 178                     (ice-9 rdelim))
 179
 180          #:phases (modify-phases %standard-phases
 181                     (replace 'bootstrap
 182                       (lambda _
 183                         ;; Make sure 'msgmerge' can modify the PO files.
 184                         (for-each (lambda (po)
 185                                     (chmod po #o666))
 186                                   (find-files "." "\\.po$"))
 187
 188                         (patch-shebang "build-aux/git-version-gen")
 189
 190                         (call-with-output-file ".tarball-version"
 191                           (lambda (port)
 192                             (display ,version port)))
 193
 194                         ;; Install SysV init files to $(prefix)/etc rather
 195                         ;; than to /etc.
 196                         (substitute* "nix/local.mk"
 197                           (("^sysvinitservicedir = .*$")
 198                            (string-append "sysvinitservicedir = \
 199 $(prefix)/etc/init.d\n")))
 200
 201                         (invoke "sh" "bootstrap")))
 202                     (add-before 'build 'use-host-compressors
 203                       (lambda* (#:key inputs target #:allow-other-keys)
 204                         (when target
 205                           ;; Use host compressors.
 206                           (let ((bzip2 (assoc-ref inputs "bzip2"))
 207                                 (gzip (assoc-ref inputs "gzip"))
 208                                 (xz (assoc-ref inputs "xz")))
 209                             (substitute* "guix/config.scm"
 210                               (("\"[^\"]*/bin/bzip2")
 211                                (string-append "\"" bzip2 "/bin/bzip2"))
 212                               (("\"[^\"]*/bin/gzip") gzip
 213                                (string-append "\"" gzip "/bin/gzip"))
 214                               (("\"[^\"]*/bin//xz")
 215                                (string-append "\"" xz "/bin/xz")))))
 216                         #t))
 217                     (add-before 'check 'copy-bootstrap-guile
 218                       (lambda* (#:key system target inputs #:allow-other-keys)
 219                         ;; Copy the bootstrap guile tarball in the store
 220                         ;; used by the test suite.
 221                         (define (intern file recursive?)
 222                           ;; Note: don't use 'guix download' here because we
 223                           ;; need to set the 'recursive?' argument.
 224                           (define base
 225                             (strip-store-file-name file))
 226
 227                           (define code
 228                             `(begin
 229                                (use-modules (guix))
 230                                (with-store store
 231                                  (let* ((item (add-to-store store ,base
 232                                                             ,recursive?
 233                                                             "sha256" ,file))
 234                                         (root (string-append "/tmp/gc-root-"
 235                                                              (basename item))))
 236                                    ;; Register a root so that the GC tests
 237                                    ;; don't delete those.
 238                                    (symlink item root)
 239                                    (add-indirect-root store root)))))
 240
 241                           (invoke "./test-env" "guile" "-c"
 242                                   (object->string code)))
 243
 244                         (unless target
 245                           (intern (assoc-ref inputs "boot-guile") #f)
 246
 247                           ;; On x86_64 some tests need the i686 Guile.
 248                           ,@(if (and (not (%current-target-system))
 249                                      (string=? (%current-system)
 250                                                "x86_64-linux"))
 251                                 '((intern (assoc-ref inputs "boot-guile/i686") #f))
 252                                 '())
 253
 254                           ;; Copy the bootstrap executables.
 255                           (for-each (lambda (input)
 256                                       (intern (assoc-ref inputs input) #t))
 257                                     '("bootstrap/bash" "bootstrap/mkdir"
 258                                       "bootstrap/tar" "bootstrap/xz")))
 259                         #t))
 260                     (add-after 'unpack 'disable-failing-tests
 261                       ;; XXX FIXME: These tests fail within the build container.
 262                       (lambda _
 263                         (substitute* "tests/syscalls.scm"
 264                           (("^\\(test-(assert|equal) \"(clone|setns|pivot-root)\"" all)
 265                            (string-append "(test-skip 1)\n" all)))
 266                         (substitute* "tests/containers.scm"
 267                           (("^\\(test-(assert|equal)" all)
 268                            (string-append "(test-skip 1)\n" all)))
 269                         (when (file-exists? "tests/guix-environment-container.sh")
 270                           (substitute* "tests/guix-environment-container.sh"
 271                             (("guix environment --version")
 272                              "exit 77\n")))
 273                         #t))
 274                     (add-before 'check 'set-SHELL
 275                       (lambda _
 276                         ;; 'guix environment' tests rely on 'SHELL' having a
 277                         ;; correct value, so set it.
 278                         (setenv "SHELL" (which "sh"))
 279                         #t))
 280                     (add-after 'install 'wrap-program
 281                       (lambda* (#:key inputs native-inputs outputs target
 282                                 #:allow-other-keys)
 283                         ;; Make sure the 'guix' command finds GnuTLS,
 284                         ;; Guile-JSON, and Guile-Git automatically.
 285                         (let* ((out    (assoc-ref outputs "out"))
 286                                (guile  ,@(if (%current-target-system)
 287                                              '((assoc-ref native-inputs "guile"))
 288                                              '((assoc-ref inputs "guile"))))
 289                                (gcrypt (assoc-ref inputs "guile-gcrypt"))
 290                                (json   (assoc-ref inputs "guile-json"))
 291                                (sqlite (assoc-ref inputs "guile-sqlite3"))
 292                                (zlib   (assoc-ref inputs "guile-zlib"))
 293                                (lzlib  (assoc-ref inputs "guile-lzlib"))
 294                                (git    (assoc-ref inputs "guile-git"))
 295                                (bs     (assoc-ref inputs
 296                                                   "guile-bytestructures"))
 297                                (ssh    (assoc-ref inputs "guile-ssh"))
 298                                (gnutls (assoc-ref inputs "gnutls"))
 299                                (locales (assoc-ref inputs "glibc-utf8-locales"))
 300                                (deps   (list gcrypt json sqlite gnutls
 301                                              git bs ssh zlib lzlib))
 302                                (effective
 303                                 (read-line
 304                                  (open-pipe* OPEN_READ
 305                                              (string-append guile "/bin/guile")
 306                                              "-c" "(display (effective-version))")))
 307                                (path   (string-join
 308                                         (map (cut string-append <>
 309                                                   "/share/guile/site/"
 310                                                   effective)
 311                                              (delete #f deps))
 312                                         ":"))
 313                                (gopath (string-join
 314                                         (map (cut string-append <>
 315                                                   "/lib/guile/" effective
 316                                                   "/site-ccache")
 317                                              (delete #f deps))
 318                                         ":"))
 319                                (locpath (string-append locales "/lib/locale")))
 320
 321                           (wrap-program (string-append out "/bin/guix")
 322                             `("GUILE_LOAD_PATH" ":" prefix (,path))
 323                             `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,gopath))
 324                             `("GUIX_LOCPATH" ":" suffix (,locpath)))
 325
 326                           (when target
 327                             ;; XXX Touching wrap-program rebuilds world
 328                             (let ((bash (assoc-ref inputs "bash")))
 329                               (substitute* (string-append out "/bin/guix")
 330                                 (("^#!.*/bash") (string-append "#! " bash "/bin/bash")))))
 331                           #t))))))
 332       (native-inputs `(("pkg-config" ,pkg-config)
 333
 334                        ;; Guile libraries are needed here for
 335                        ;; cross-compilation.
 336                        ("guile" ,guile-3.0-latest) ;for faster builds
 337                        ("gnutls" ,gnutls)
 338                        ("guile-gcrypt" ,guile-gcrypt)
 339                        ("guile-json" ,guile-json-4)
 340                        ("guile-sqlite3" ,guile-sqlite3)
 341                        ("guile-zlib" ,guile-zlib)
 342                        ("guile-lzlib" ,guile-lzlib)
 343                        ("guile-ssh" ,guile-ssh)
 344                        ("guile-git" ,guile-git)
 345
 346                        ;; XXX: Keep the development inputs here even though
 347                        ;; they're unnecessary, just so that 'guix environment
 348                        ;; guix' always contains them.
 349                        ("autoconf" ,autoconf-wrapper)
 350                        ("automake" ,automake)
 351                        ("gettext" ,gettext-minimal)
 352                        ("texinfo" ,texinfo)
 353                        ("graphviz" ,graphviz)
 354                        ("help2man" ,help2man)
 355                        ("po4a" ,po4a)))
 356       (inputs
 357        `(("bzip2" ,bzip2)
 358          ("gzip" ,gzip)
 359          ("sqlite" ,sqlite)
 360          ("libgcrypt" ,libgcrypt)
 361
 362          ("guile" ,guile-3.0-latest)
 363
 364          ;; Some of the tests use "unshare" when it is available.
 365          ("util-linux" ,util-linux)
 366
 367          ;; Many tests rely on the 'guile-bootstrap' package, which is why we
 368          ;; have it here.
 369          ("boot-guile" ,(bootstrap-guile-origin (%current-system)))
 370          ,@(if (and (not (%current-target-system))
 371                     (string=? (%current-system) "x86_64-linux"))
 372                `(("boot-guile/i686" ,(bootstrap-guile-origin "i686-linux")))
 373                '())
 374          ,@(if (%current-target-system)
 375                `(("bash" ,bash-minimal)
 376                  ("xz" ,xz))
 377                '())
 378
 379          ;; Tests also rely on these bootstrap executables.
 380          ("bootstrap/bash" ,(bootstrap-executable "bash" (%current-system)))
 381          ("bootstrap/mkdir" ,(bootstrap-executable "mkdir" (%current-system)))
 382          ("bootstrap/tar" ,(bootstrap-executable "tar" (%current-system)))
 383          ("bootstrap/xz" ,(bootstrap-executable "xz" (%current-system)))
 384
 385          ("glibc-utf8-locales" ,glibc-utf8-locales)))
 386       (propagated-inputs
 387        `(("gnutls" ,(if (%current-target-system) gnutls-3.6.14 guile3.0-gnutls))
 388          ("guile-gcrypt" ,guile-gcrypt)
 389          ("guile-json" ,guile-json-4)
 390          ("guile-sqlite3" ,guile-sqlite3)
 391          ("guile-ssh" ,guile-ssh)
 392          ("guile-git" ,guile-git)
 393          ("guile-zlib" ,guile-zlib)
 394          ("guile-lzlib" ,guile-lzlib)))
 395
 396       (home-page "https://www.gnu.org/software/guix/")
 397       (synopsis "Functional package manager for installed software packages and versions")
 398       (description
 399        "GNU Guix is a functional package manager for the GNU system, and is
 400 also a distribution thereof.  It includes a virtual machine image.  Besides
 401 the usual package management features, it also supports transactional
 402 upgrades and roll-backs, per-user profiles, and much more.  It is based on
 403 the Nix package manager.")
 404       (license license:gpl3+)
 405       (properties '((ftp-server . "alpha.gnu.org"))))))
 406
 407 (define-public guix-daemon
 408   ;; This package is for internal consumption: it allows us to quickly build
 409   ;; the 'guix-daemon' program and use that in (guix self), used by 'guix
 410   ;; pull'.
 411   (package
 412     (inherit guix)
 413     (properties `((hidden? . #t)))
 414     (name "guix-daemon")
 415
 416     ;; Use a minimum set of dependencies.
 417     (native-inputs
 418      (fold alist-delete (package-native-inputs guix)
 419            '("po4a" "graphviz" "help2man")))
 420     (inputs
 421      `(("gnutls" ,guile3.0-gnutls)
 422        ("guile-git" ,guile-git)
 423        ("guile-json" ,guile-json-3)
 424        ("guile-gcrypt" ,guile-gcrypt)
 425        ,@(fold alist-delete (package-inputs guix)
 426                '("boot-guile" "boot-guile/i686" "util-linux"))))
 427
 428     (propagated-inputs '())
 429
 430     (arguments
 431      (substitute-keyword-arguments (package-arguments guix)
 432        ((#:configure-flags flags '())
 433         ;; Pretend we have those libraries; we don't actually need them.
 434         `(append ,flags
 435                  '("guix_cv_have_recent_guile_sqlite3=yes"
 436                    "guix_cv_have_recent_guile_ssh=yes")))
 437        ((#:tests? #f #f)
 438         #f)
 439        ((#:phases phases '%standard-phases)
 440         `(modify-phases ,phases
 441            (add-after 'unpack 'change-default-guix
 442              (lambda _
 443                ;; We need to tell 'guix-daemon' which 'guix' command to use.
 444                ;; Here we use a questionable hack where we hard-code root's
 445                ;; current guix, which could be wrong (XXX).  Note that scripts
 446                ;; like 'guix perform-download' do not run as root so we assume
 447                ;; that they have access to /var/guix/profiles/per-user/root.
 448                (substitute* "nix/libstore/globals.cc"
 449                  (("guixProgram = (.*)nixBinDir + \"/guix\"" _ before)
 450                   (string-append "guixProgram = " before
 451                                  "/var/guix/profiles/per-user/root\
 452 /current-guix/bin/guix")))
 453                #t))
 454            (replace 'build
 455              (lambda _
 456                (invoke "make" "nix/libstore/schema.sql.hh")
 457                (invoke "make" "-j" (number->string
 458                                     (parallel-job-count))
 459                        "guix-daemon")))
 460            (delete 'copy-bootstrap-guile)
 461            (replace 'install
 462              (lambda* (#:key outputs #:allow-other-keys)
 463                (invoke "make" "install-binPROGRAMS")))
 464            (delete 'wrap-program)))))))
 465
 466
 467 (define-public guile2.2-guix
 468   (package
 469     (inherit guix)
 470     (name "guile2.2-guix")
 471     (native-inputs
 472      `(("guile" ,guile-2.2)
 473        ("gnutls" ,guile2.2-gnutls)
 474        ("guile-gcrypt" ,guile2.2-gcrypt)
 475        ("guile-json" ,guile2.2-json)
 476        ("guile-sqlite3" ,guile2.2-sqlite3)
 477        ("guile-ssh" ,guile2.2-ssh)
 478        ("guile-git" ,guile2.2-git)
 479        ,@(fold alist-delete (package-native-inputs guix)
 480                '("guile" "gnutls" "guile-gcrypt" "guile-json"
 481                  "guile-sqlite3" "guile-ssh" "guile-git"))))
 482     (inputs
 483      `(("guile" ,guile-2.2)
 484        ,@(alist-delete "guile" (package-inputs guix))))
 485     (propagated-inputs
 486      `(("gnutls" ,gnutls)
 487        ("guile-gcrypt" ,guile2.2-gcrypt)
 488        ("guile-json" ,guile2.2-json)
 489        ("guile-sqlite3" ,guile2.2-sqlite3)
 490        ("guile-ssh" ,guile2.2-ssh)
 491        ("guile-git" ,guile2.2-git)))))
 492
 493 (define-public guile3.0-guix
 494   (deprecated-package "guile3.0-guix" guix))
 495
 496 (define-public guix-minimal
 497   ;; A version of Guix which is built with the minimal set of dependencies, as
 498   ;; outlined in the README "Requirements" section.  Intended as a CI job, so
 499   ;; marked as hidden.
 500   (hidden-package
 501    (package
 502      (inherit guix)
 503      (name "guix-minimal")
 504      (native-inputs
 505       (fold alist-delete
 506             (package-native-inputs guix)
 507             '("guile-ssh")))
 508      (propagated-inputs
 509       (fold alist-delete
 510             (package-propagated-inputs guix)
 511             '("guile-ssh"))))))
 512
 513 (define (source-file? file stat)
 514   "Return true if FILE is likely a source file, false if it is a typical
 515 generated file."
 516   (define (wrong-extension? file)
 517     (or (string-suffix? "~" file)
 518         (member (file-extension file)
 519                 '("o" "a" "lo" "so" "go"))))
 520
 521   (match (basename file)
 522     ((or ".git" "autom4te.cache" "configure" "Makefile" "Makefile.in" ".libs")
 523      #f)
 524     ((? wrong-extension?)
 525      #f)
 526     (_
 527      #t)))
 528
 529 (define-public current-guix-package
 530   ;; This parameter allows callers to override the package that 'current-guix'
 531   ;; returns.  This is useful when 'current-guix' cannot compute it by itself,
 532   ;; for instance because it's not running from a source code checkout.
 533   (make-parameter #f))
 534
 535 (define-public current-guix
 536   (let* ((repository-root (delay (canonicalize-path
 537                                   (string-append (current-source-directory)
 538                                                  "/../.."))))
 539          (select? (delay (or (git-predicate (force repository-root))
 540                              source-file?))))
 541     (lambda ()
 542       "Return a package representing Guix built from the current source tree.
 543 This works by adding the current source tree to the store (after filtering it
 544 out) and returning a package that uses that as its 'source'."
 545       (or (current-guix-package)
 546           (package
 547             (inherit guix)
 548             (version (string-append (package-version guix) "+"))
 549             (source (local-file (force repository-root) "guix-current"
 550                                 #:recursive? #t
 551                                 #:select? (force select?))))))))
 552
 553 \f
 554 ;;;
 555 ;;; Other tools.
 556 ;;;
 557
 558 (define-public nix
 559   (package
 560     (name "nix")
 561     (version "2.3.6")
 562     (source (origin
 563              (method url-fetch)
 564              (uri (string-append "http://nixos.org/releases/nix/nix-"
 565                                  version "/nix-" version ".tar.xz"))
 566              (sha256
 567               (base32
 568                "128xf2as0y7hr28x575pbf9lkjpxr9hsxknbavv4p7ywr4lhbs85"))))
 569     (build-system gnu-build-system)
 570     (arguments
 571      `(#:configure-flags
 572        (list "--sysconfdir=/etc")
 573        #:phases
 574        (modify-phases %standard-phases
 575          (replace 'install
 576            ;; Don't try & fail to create subdirectories in /etc, but keep them
 577            ;; in the output as examples.
 578            (lambda* (#:key (make-flags '()) outputs #:allow-other-keys)
 579              (let* ((out (assoc-ref outputs "out"))
 580                     (etc (string-append out "/etc")))
 581                (apply invoke "make" "install"
 582                       (string-append "sysconfdir=" etc)
 583                       (string-append "profiledir=" etc "/profile.d")
 584                       make-flags)))))))
 585     (native-inputs `(("pkg-config" ,pkg-config)))
 586     (inputs `(("boost" ,boost)
 587               ("brotli" ,brotli)
 588               ("bzip2" ,bzip2)
 589               ("curl" ,curl)
 590               ("editline" ,editline)
 591               ("libgc" ,libgc)
 592               ("libseccomp" ,libseccomp)
 593               ("libsodium" ,libsodium)
 594               ("openssl" ,openssl)
 595               ("sqlite" ,sqlite)
 596               ("xz" ,xz)))
 597     (home-page "https://nixos.org/nix/")
 598     (synopsis "The Nix package manager")
 599     (description
 600      "Nix is a purely functional package manager.  This means that it treats
 601 packages like values in purely functional programming languages such as
 602 Haskell—they are built by functions that don't have side-effects, and they
 603 never change after they have been built.  Nix stores packages in the Nix
 604 store, usually the directory /nix/store, where each package has its own unique
 605 sub-directory.")
 606     (license license:lgpl2.1+)))
 607
 608 (define-public stow
 609   (package
 610     (name "stow")
 611     (version "2.3.1")
 612     (source (origin
 613               (method url-fetch)
 614               (uri (string-append "mirror://gnu/stow/stow-"
 615                                   version ".tar.gz"))
 616               (sha256
 617                (base32
 618                 "0jrxy12ywn7smdzdnvwzjw77l6knx6jkj2rckgykg1dpf6bdkm89"))))
 619     (build-system gnu-build-system)
 620     (inputs
 621      `(("perl" ,perl)))
 622     (native-inputs
 623      `(("perl-test-simple" ,perl-test-simple)
 624        ("perl-test-output" ,perl-test-output)
 625        ("perl-capture-tiny" ,perl-capture-tiny)
 626        ("perl-io-stringy" ,perl-io-stringy)))
 627     (home-page "https://www.gnu.org/software/stow/")
 628     (synopsis "Managing installed software packages")
 629     (description
 630      "GNU Stow is a symlink manager.  It generates symlinks to directories
 631 of data and makes them appear to be merged into the same directory.  It is
 632 typically used for managing software packages installed from source, by
 633 letting you install them apart in distinct directories and then create
 634 symlinks to the files in a common directory such as /usr/local.")
 635     (license license:gpl3+)))
 636
 637 (define-public rpm
 638   (package
 639     (name "rpm")
 640     (version "4.14.2.1")
 641     (source (origin
 642               (method url-fetch)
 643               (uri (string-append "http://ftp.rpm.org/releases/rpm-"
 644                                   (version-major+minor version) ".x/rpm-"
 645                                   version ".tar.bz2"))
 646               (sha256
 647                (base32
 648                 "1nmck2fq9h85fgs3zhh6w1avlw5y16cbz5khd459ry3jfd5w4f8i"))))
 649     (build-system gnu-build-system)
 650     (arguments
 651      '(#:configure-flags '("--with-external-db"   ;use the system's bdb
 652                            "--enable-python"
 653                            "--without-lua")
 654        #:phases (modify-phases %standard-phases
 655                   (add-before 'configure 'set-nss-library-path
 656                     (lambda* (#:key inputs #:allow-other-keys)
 657                       (let ((nss (assoc-ref inputs "nss")))
 658                         (setenv "LIBRARY_PATH"
 659                                 (string-append (getenv "LIBRARY_PATH") ":"
 660                                                nss "/lib/nss"))
 661                         #t))))))
 662     (native-inputs
 663      `(("pkg-config" ,pkg-config)))
 664     (inputs
 665      `(("python" ,python)
 666        ("xz" ,xz)
 667        ("bdb" ,bdb)
 668        ("popt" ,popt)
 669        ("nss" ,nss)
 670        ("nspr" ,nspr)
 671        ("libarchive" ,libarchive)
 672        ("file" ,file)
 673        ("bzip2" ,bzip2)
 674        ("zlib" ,zlib)
 675        ("cpio" ,cpio)))
 676     (home-page "https://rpm.org/")
 677     (synopsis "The RPM Package Manager")
 678     (description
 679      "The RPM Package Manager (RPM) is a command-line driven package
 680 management system capable of installing, uninstalling, verifying, querying,
 681 and updating computer software packages.  Each software package consists of an
 682 archive of files along with information about the package like its version, a
 683 description.  There is also a library permitting developers to manage such
 684 transactions from C or Python.")
 685
 686     ;; The whole is GPLv2+; librpm itself is dual-licensed LGPLv2+ | GPLv2+.
 687     (license license:gpl2+)))
 688
 689 (define-public python-anaconda-client
 690   (package
 691     (name "python-anaconda-client")
 692     (version "1.6.3")
 693     (source
 694      (origin
 695        (method git-fetch)
 696        (uri (git-reference
 697               (url "https://github.com/Anaconda-Platform/anaconda-client")
 698               (commit version)))
 699        (file-name (git-file-name name version))
 700        (sha256
 701         (base32
 702          "0w1bfxnydjl9qp53r2gcvr6vlpdqqilcrzqxrll9sgg6vwdyiyyp"))))
 703     (build-system python-build-system)
 704     (propagated-inputs
 705      `(("python-pyyaml" ,python-pyyaml)
 706        ("python-requests" ,python-requests)
 707        ("python-clyent" ,python-clyent)))
 708     (native-inputs
 709      `(("python-pytz" ,python-pytz)
 710        ("python-dateutil" ,python-dateutil)
 711        ("python-mock" ,python-mock)
 712        ("python-coverage" ,python-coverage)
 713        ("python-pillow" ,python-pillow)))
 714     (arguments
 715      `(#:phases
 716        (modify-phases %standard-phases
 717          ;; This is needed for some tests.
 718          (add-before 'check 'set-up-home
 719            (lambda* _ (setenv "HOME" "/tmp") #t))
 720          (add-before 'check 'remove-network-tests
 721            (lambda* _
 722              ;; Remove tests requiring a network connection
 723              (let ((network-tests '("tests/test_upload.py"
 724                                     "tests/test_authorizations.py"
 725                                     "tests/test_login.py"
 726                                     "tests/test_whoami.py"
 727                                     "utils/notebook/tests/test_data_uri.py"
 728                                     "utils/notebook/tests/test_base.py"
 729                                     "utils/notebook/tests/test_downloader.py"
 730                                     "inspect_package/tests/test_conda.py")))
 731                (with-directory-excursion "binstar_client"
 732                  (for-each delete-file network-tests)))
 733              #t)))))
 734     (home-page "https://github.com/Anaconda-Platform/anaconda-client")
 735     (synopsis "Anaconda Cloud command line client library")
 736     (description
 737      "Anaconda Cloud command line client library provides an interface to
 738 Anaconda Cloud.  Anaconda Cloud is useful for sharing packages, notebooks and
 739 environments.")
 740     (license license:bsd-3)))
 741
 742 (define-public python2-anaconda-client
 743   (package-with-python2 python-anaconda-client))
 744
 745 (define-public python-conda-package-handling
 746   (package
 747     (name "python-conda-package-handling")
 748     (version "1.6.0")
 749     (source
 750      (origin
 751        (method git-fetch)
 752        (uri (git-reference
 753              (url "https://github.com/conda/conda-package-handling/")
 754              (commit version)))
 755        (file-name (git-file-name name version))
 756        (sha256
 757         (base32
 758          "0bqbs6a8jbjmbn47n5n1p529cx7pf4vgfnhqca9mflgidfb5i0jf"))))
 759     (build-system python-build-system)
 760     (arguments
 761      `(#:phases
 762        (modify-phases %standard-phases
 763          (add-after 'unpack 'use-unmodified-libarchive
 764            (lambda _
 765              (substitute* "setup.py"
 766                (("archive_and_deps") "archive"))
 767              #t))
 768          (replace 'check
 769            (lambda* (#:key inputs outputs #:allow-other-keys)
 770              (add-installed-pythonpath inputs outputs)
 771              (invoke "pytest" "-vv" "tests"
 772                      "-k"
 773                      (string-append
 774                       ;; TODO: these three fail because the mocker fixture
 775                       ;; cannot be found
 776                       "not test_rename_to_trash"
 777                       " and not test_api_extract_tarball_with_libarchive_import_error"
 778                       " and not test_delete_trash"
 779                       ;; TODO: this one does not raise an exception when it
 780                       ;; should.
 781                       " and not test_secure_refusal_to_extract_abs_paths")))))))
 782     (propagated-inputs
 783      `(("python-six" ,python-six)
 784        ("python-tqdm" ,python-tqdm)))
 785     (inputs
 786      `(("libarchive" ,libarchive)))
 787     (native-inputs
 788      `(("python-cython" ,python-cython)
 789        ("python-pytest" ,python-pytest)
 790        ("python-pytest-cov" ,python-pytest-cov)
 791        ("python-mock" ,python-mock)))
 792     (home-page "https://conda.io")
 793     (synopsis "Create and extract conda packages of various formats")
 794     (description
 795      "This library is an abstraction of Conda package handling and a tool for
 796 extracting, creating, and converting between formats.")
 797     (license license:bsd-3)))
 798
 799 (define-public conda
 800   (package
 801     (name "conda")
 802     (version "4.8.3")
 803     (source
 804      (origin
 805        (method git-fetch)
 806        (uri (git-reference
 807               (url "https://github.com/conda/conda")
 808               (commit version)))
 809        (file-name (git-file-name name version))
 810        (sha256
 811         (base32
 812          "0iv1qzk21jsk6vdp3106xvpvl68zgfdqb3kyzpya87jhkl204l7r"))))
 813     (build-system python-build-system)
 814     (arguments
 815      `(#:phases
 816        (modify-phases %standard-phases
 817          (add-after 'unpack 'fix-permissions
 818            (lambda _
 819              ;; This file is no longer writable after downloading with
 820              ;; 'git-fetch'
 821              (make-file-writable
 822               "tests/conda_env/support/saved-env/environment.yml")
 823              #t))
 824          (add-after 'unpack 'correct-python-executable-name
 825            (lambda* (#:key inputs #:allow-other-keys)
 826              (let ((python (assoc-ref inputs "python-wrapper")))
 827                #;
 828                (substitute* "conda/common/path.py"
 829                  (("python_version or ''")
 830                   "python_version or '3'"))
 831                (substitute* "conda/core/initialize.py"
 832                  (("python_exe = join")
 833                   (format #f "python_exe = \"~a/bin/python\" #"
 834                           python))))
 835              #t))
 836          (add-after 'unpack 'do-not-use-python-root-as-prefix
 837            (lambda* (#:key inputs outputs #:allow-other-keys)
 838              (let ((out (assoc-ref outputs "out"))
 839                    (python (assoc-ref inputs "python-wrapper")))
 840                (substitute* "tests/core/test_initialize.py"
 841                  (("\"\"\"\\) % conda_prefix")
 842                   (format #f "\"\"\") % \"~a\"" python))
 843                  (("CONDA_PYTHON_EXE \"%s\"' % join\\(conda_prefix")
 844                   (format #f "CONDA_PYTHON_EXE \"%s\"' % join(\"~a\""
 845                           python))
 846                  (("conda_prefix = abspath\\(sys.prefix\\)")
 847                   (format #f "conda_prefix = abspath(\"~a\")" out)))
 848                (substitute* "conda/base/context.py"
 849                  (("os.chdir\\(sys.prefix\\)")
 850                   (format #f "os.chdir(\"~a\")" out))
 851                  (("sys.prefix, '.condarc'")
 852                   (format #f "\"~a\", '.condarc'" out))
 853                  (("return abspath\\(sys.prefix\\)")
 854                   (format #f "return abspath(\"~a\")" out))
 855                  (("os.path.join\\(sys.prefix, bin_dir, exe\\)")
 856                   (format #f "\"~a/bin/conda\"" out))
 857                  (("'CONDA_EXE', sys.executable")
 858                   (format #f "'CONDA_EXE', \"~a/bin/conda\"" out))))
 859              #t))
 860          (add-before 'build 'create-version-file
 861            (lambda _
 862              (with-output-to-file "conda/.version"
 863                (lambda () (display ,version)))
 864              #t))
 865          (replace 'check
 866            (lambda _
 867              (setenv "HOME" "/tmp")
 868              (invoke "py.test" "-vv"
 869                      "-k"
 870                      (string-append
 871                       "not integration"
 872                       ;; This one reports a newer version of conda than
 873                       ;; expected.
 874                       " and not test_auto_update_conda"
 875                       ;; This fails because the output directory is not a
 876                       ;; Conda environment.
 877                       " and not test_list"
 878                       ;; This fails because we patched the default root
 879                       ;; prefix.
 880                       " and not test_default_target_is_root_prefix"
 881                       ;; TODO: I don't understand what this failure means
 882                       " and not test_PrefixData_return_value_contract"
 883                       ;; TODO: same here
 884                       " and not test_install_1"
 885                       ;; Not sure if this is really wrong.  This fails because
 886                       ;; /gnu/store/...python-conda-4.8.3/bin/python
 887                       ;; is not /gnu/store/...python-wrapper-3.8.2/bin/python
 888                       " and not test_make_entry_point"))))
 889          (add-after 'install 'init
 890            ;; This writes a whole bunch of shell initialization files to the
 891            ;; prefix directory.  Many features of conda can only be used after
 892            ;; running "conda init".
 893            (lambda* (#:key inputs outputs #:allow-other-keys)
 894              (add-installed-pythonpath inputs outputs)
 895              (setenv "HOME" "/tmp")
 896
 897              ;; "conda init" insists on using sudo, because it is hell-bent on
 898              ;; modifying system files.
 899              (mkdir-p "/tmp/fake-sudo")
 900              (with-output-to-file "/tmp/fake-sudo/sudo"
 901                (lambda () (format #t "#!~/bin/sh~%exec $@" (which "sh"))))
 902              (chmod "/tmp/fake-sudo/sudo" #o700)
 903              (setenv "PATH" (string-append "/tmp/fake-sudo:"
 904                                            (getenv "PATH")))
 905
 906              (invoke (string-append (assoc-ref outputs "out")
 907                                     "/bin/conda")
 908                      "init"))))))
 909     (inputs
 910      `(("python-wrapper" ,python-wrapper)))
 911     (propagated-inputs
 912      `(("python-anaconda-client" ,python-anaconda-client)
 913        ("python-conda-package-handling" ,python-conda-package-handling)
 914        ("python-cytoolz" ,python-cytoolz)
 915        ("python-pycosat" ,python-pycosat)
 916        ("python-pytest" ,python-pytest)
 917        ("python-pyyaml" ,python-pyyaml)
 918        ("python-requests" ,python-requests)
 919        ("python-responses" ,python-responses)
 920        ("python-ruamel.yaml" ,python-ruamel.yaml)
 921        ("python-tqdm" ,python-tqdm)
 922        ;; XXX: This is dragged in by libarchive and is needed at runtime.
 923        ("zstd" ,zstd)))
 924     (home-page "https://github.com/conda/conda")
 925     (synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
 926     (description
 927      "Conda is a cross-platform, Python-agnostic binary package manager.  It
 928 is the package manager used by Anaconda installations, but it may be used for
 929 other systems as well.  Conda makes environments first-class citizens, making
 930 it easy to create independent environments even for C libraries.  Conda is
 931 written entirely in Python.")
 932     (license license:bsd-3)))
 933
 934 (define-public python-conda
 935   (deprecated-package "python-conda" conda))
 936
 937 (define-public gwl
 938   (package
 939     (name "gwl")
 940     (version "0.2.1")
 941     (source (origin
 942               (method url-fetch)
 943               (uri (string-append "mirror://gnu/gwl/gwl-" version ".tar.gz"))
 944               (sha256
 945                (base32
 946                 "1ji5jvzni8aml9fmimlr11g3k8isrnlvnbzhmwgdjh72hils0alc"))))
 947     (build-system gnu-build-system)
 948     (arguments
 949      `(#:phases
 950        (modify-phases %standard-phases
 951          (add-before 'build 'fix-tests
 952            (lambda _
 953              ;; Avoid cross-device link.
 954              (substitute* "tests/cache.scm"
 955                (("/tmp/gwl-test-input-XXXXXX")
 956                 (string-append (getcwd) "/gwl-test-input-XXXXXX")))
 957              #t)))))
 958     (native-inputs
 959      `(("autoconf" ,autoconf)
 960        ("automake" ,automake)
 961        ("pkg-config" ,pkg-config)
 962        ("texinfo" ,texinfo)
 963        ("graphviz" ,graphviz)))
 964     (inputs
 965      `(("guile" ,@(assoc-ref (package-native-inputs guix) "guile"))))
 966     (propagated-inputs
 967      `(("guix" ,guix)
 968        ("guile-commonmark" ,guile-commonmark)
 969        ("guile-gcrypt" ,guile-gcrypt)
 970        ("guile-pfds" ,guile-pfds)
 971        ("guile-syntax-highlight" ,guile-syntax-highlight)
 972        ("guile-wisp" ,guile-wisp)))
 973     (home-page "https://workflows.guix.info")
 974     (synopsis "Workflow management extension for GNU Guix")
 975     (description "The @dfn{Guix Workflow Language} (GWL) provides an
 976 extension to GNU Guix's declarative language for package management to
 977 automate the execution of programs in scientific workflows.  The GWL
 978 can use process engines to integrate with various computing
 979 environments.")
 980     ;; The Scheme modules in guix/ and gnu/ are licensed GPL3+,
 981     ;; the web interface modules in gwl/ are licensed AGPL3+,
 982     ;; and the fonts included in this package are licensed OFL1.1.
 983     (license (list license:gpl3+ license:agpl3+ license:silofl1.1))))
 984
 985 (define-public guix-jupyter
 986   (package
 987     (name "guix-jupyter")
 988     (version "0.1.0")
 989     (home-page "https://gitlab.inria.fr/guix-hpc/guix-kernel")
 990     (source (origin
 991               (method git-fetch)
 992               (uri (git-reference (url home-page)
 993                                   (commit (string-append "v" version))))
 994               (sha256
 995                (base32
 996                 "01z7jjkc7r7lj6637rcgpz40v8xqqyfp6871h94yvcnwm7zy9h1n"))
 997               (modules '((guix build utils)))
 998               (snippet
 999                '(begin
1000                   ;; Allow builds with Guile 3.0.
1001                   (substitute* "configure.ac"
1002                     (("^GUILE_PKG.*")
1003                      "GUILE_PKG([3.0 2.2])\n"))
1004                   #t))
1005               (file-name (string-append "guix-jupyter-" version "-checkout"))))
1006     (build-system gnu-build-system)
1007     (arguments
1008      `(#:modules ((srfi srfi-26)
1009                   (ice-9 match)
1010                   (ice-9 popen)
1011                   (ice-9 rdelim)
1012                   (guix build utils)
1013                   (guix build gnu-build-system))
1014        #:phases
1015        (modify-phases %standard-phases
1016          (add-after 'install 'sed-kernel-json
1017            (lambda* (#:key inputs outputs #:allow-other-keys)
1018              (let* ((out   (assoc-ref outputs "out"))
1019                     (guix  (assoc-ref inputs  "guix"))
1020                     (guile (assoc-ref inputs  "guile"))
1021                     (json  (assoc-ref inputs  "guile-json"))
1022                     (git   (assoc-ref inputs  "guile-git"))
1023                     (bs    (assoc-ref inputs  "guile-bytestructures"))
1024                     (s-zmq (assoc-ref inputs  "guile-simple-zmq"))
1025                     (gcrypt (assoc-ref inputs  "guile-gcrypt"))
1026                     (deps  (list out s-zmq guix json git bs gcrypt))
1027                     (effective
1028                      (read-line
1029                       (open-pipe* OPEN_READ
1030                                   (string-append guile "/bin/guile")
1031                                   "-c" "(display (effective-version))")))
1032                     (path (map (cut string-append "-L\", \"" <>
1033                                     "/share/guile/site/"
1034                                     effective)
1035                                deps))
1036                     (gopath (map (cut string-append "-C\", \"" <>
1037                                       "/lib/guile/" effective
1038                                       "/site-ccache")
1039                                  deps))
1040                     (kernel-dir (string-append out "/share/jupyter/kernels/guix/")))
1041                (substitute* (string-append kernel-dir "kernel.json")
1042                  (("-s")
1043                   (string-join
1044                    (list (string-join path "\",\n\t\t\"")
1045                          (string-join gopath "\",\n\t\t\"")
1046                          "-s")
1047                    "\",\n\t\t\""))
1048                  (("guix-jupyter-kernel.scm")
1049                   (string-append out "/share/guile/site/3.0/"
1050                                  "guix-jupyter-kernel.scm")))
1051                #t))))))
1052     (native-inputs
1053      `(("autoconf" ,autoconf)
1054        ("automake" ,automake)
1055        ("pkg-config" ,pkg-config)
1056
1057        ;; For testing.
1058        ("jupyter" ,jupyter)
1059        ("python-ipython" ,python-ipython)
1060        ("python-ipykernel" ,python-ipykernel)))
1061     (inputs
1062      `(("guix" ,guix)
1063        ("guile" ,@(assoc-ref (package-native-inputs guix) "guile"))))
1064     (propagated-inputs
1065      `(("guile-json" ,guile-json-4)
1066        ("guile-simple-zmq" ,guile-simple-zmq)
1067        ("guile-gcrypt" ,guile-gcrypt)))
1068     (synopsis "Guix kernel for Jupyter")
1069     (description
1070      "Guix-Jupyter is a Jupyter kernel.  It allows you to annotate notebooks
1071 with information about their software dependencies, such that code is executed
1072 in the right software environment.  Guix-Jupyter spawns the actual kernels
1073 such as @code{python-ipykernel} on behalf of the notebook user and runs them
1074 in an isolated environment, in separate namespaces.")
1075     (license license:gpl3+)))
1076
1077 (define-public gcab
1078   (package
1079     (name "gcab")
1080     (version "1.2")
1081     (source (origin
1082               (method url-fetch)
1083               (uri (string-append "mirror://gnome/sources/gcab/"
1084                                   version "/gcab-" version ".tar.xz"))
1085               (sha256
1086                (base32
1087                 "038h5kk41si2hc9d9169rrlvp8xgsxq27kri7hv2vr39gvz9cbas"))))
1088     (build-system meson-build-system)
1089     (native-inputs
1090      `(("glib:bin" ,glib "bin")         ; for glib-mkenums
1091        ("intltool" ,intltool)
1092        ("pkg-config" ,pkg-config)
1093        ("vala" ,vala)))
1094     (inputs
1095      `(("glib" ,glib)
1096        ("zlib" ,zlib)))
1097     (arguments
1098      `(#:configure-flags
1099        ;; XXX This ‘documentation’ is for developers, and fails informatively:
1100        ;; Error in gtkdoc helper script: 'gtkdoc-mkhtml' failed with status 5
1101        (list "-Ddocs=false"
1102              "-Dintrospection=false")))
1103     (home-page "https://wiki.gnome.org/msitools") ; no dedicated home page
1104     (synopsis "Microsoft Cabinet file manipulation library")
1105     (description
1106      "The libgcab library provides GObject functions to read, write, and modify
1107 Microsoft cabinet (.@dfn{CAB}) files.")
1108     (license (list license:gpl2+        ; tests/testsuite.at
1109                    license:lgpl2.1+)))) ; the rest
1110
1111 (define-public msitools
1112   (package
1113     (name "msitools")
1114     (version "0.100")
1115     (source (origin
1116               (method url-fetch)
1117               (uri (string-append "mirror://gnome/sources/msitools/"
1118                                   version "/msitools-" version ".tar.xz"))
1119               (sha256
1120                (base32
1121                 "1skq17qr2ic4qr3779j49byfm8rncwbsq9rj1a33ncn2m7isdwdv"))))
1122     (build-system gnu-build-system)
1123     (native-inputs
1124      `(("bison" ,bison)
1125        ("pkg-config" ,pkg-config)))
1126     (inputs
1127      `(("gcab" ,gcab)
1128        ("glib" ,glib)
1129        ("libgsf" ,libgsf)
1130        ("libxml2" ,libxml2)
1131        ("uuid" ,util-linux "lib")))
1132     (home-page "https://wiki.gnome.org/msitools")
1133     (synopsis "Windows Installer file manipulation tool")
1134     (description
1135      "msitools is a collection of command-line tools to inspect, extract, build,
1136 and sign Windows@tie{}Installer (.@dfn{MSI}) files.  It aims to be a solution
1137 for packaging and deployment of cross-compiled Windows applications.")
1138     (license license:lgpl2.1+)))
1139
1140 (define-public libostree
1141   (package
1142     (name "libostree")
1143     (version "2020.5")
1144     (source (origin
1145               (method url-fetch)
1146               (uri (string-append
1147                     "https://github.com/ostreedev/ostree/releases/download/v"
1148                     (version-major+minor version) "/libostree-" version ".tar.xz"))
1149               (sha256
1150                (base32
1151                 "1k92177hjalbdpmg45ymwwrni68vh9rs5x9zvy5fzl9lng12fgpb"))))
1152     (build-system gnu-build-system)
1153     (arguments
1154      '(#:phases
1155        (modify-phases %standard-phases
1156          (add-before 'check 'pre-check
1157            (lambda _
1158              ;; Don't try to use the non-existing '/var/tmp' as test
1159              ;; directory.
1160              (setenv "TEST_TMPDIR" (getenv "TMPDIR"))
1161              #t)))
1162        ;; XXX: fails with:
1163        ;;     tap-driver.sh: missing test plan
1164        ;;     tap-driver.sh: internal error getting exit status
1165        ;;     tap-driver.sh: fatal: I/O or internal error
1166        #:tests? #f))
1167     (native-inputs
1168      `(("attr" ,attr)                   ; for tests
1169        ("bison" ,bison)
1170        ("glib:bin" ,glib "bin")         ; for 'glib-mkenums'
1171        ("gobject-introspection" ,gobject-introspection)
1172        ("pkg-config" ,pkg-config)
1173        ("xsltproc" ,libxslt)))
1174     (inputs
1175      `(("avahi" ,avahi)
1176        ("docbook-xml" ,docbook-xml-4.2)
1177        ("docbook-xsl" ,docbook-xsl)
1178        ("e2fsprogs" ,e2fsprogs)
1179        ("fuse" ,fuse)
1180        ("glib" ,glib)
1181        ("gpgme" ,gpgme)
1182        ("libarchive" ,libarchive)
1183        ("libsoup" ,libsoup)
1184        ("util-linux" ,util-linux)))
1185     (home-page "https://ostree.readthedocs.io/en/latest/")
1186     (synopsis "Operating system and container binary deployment and upgrades")
1187     (description
1188      "@code{libostree} is both a shared library and suite of command line
1189 tools that combines a \"git-like\" model for committing and downloading
1190 bootable file system trees, along with a layer for deploying them and managing
1191 the boot loader configuration.")
1192     (license license:lgpl2.0+)))
1193
1194 (define-public flatpak
1195   (package
1196    (name "flatpak")
1197    (version "1.8.2")
1198    (source
1199     (origin
1200      (method url-fetch)
1201      (uri (string-append "https://github.com/flatpak/flatpak/releases/download/"
1202                          version "/flatpak-" version ".tar.xz"))
1203      (sha256
1204       (base32 "1c45a0k7wx685n5b3ihv7dk0mm2kmwbw7cx8w5g2la62yxfn49kr"))))
1205
1206    ;; Wrap 'flatpak' so that GIO_EXTRA_MODULES is set, thereby allowing GIO to
1207    ;; find the TLS backend in glib-networking.
1208    (build-system glib-or-gtk-build-system)
1209
1210    (arguments
1211     '(#:configure-flags
1212       (list
1213        "--enable-documentation=no" ;; FIXME
1214        "--enable-system-helper=no"
1215        "--localstatedir=/var"
1216        (string-append "--with-system-bubblewrap="
1217                       (assoc-ref %build-inputs "bubblewrap")
1218                       "/bin/bwrap")
1219        (string-append "--with-system-dbus-proxy="
1220                       (assoc-ref %build-inputs "xdg-dbus-proxy")
1221                       "/bin/xdg-dbus-proxy"))
1222       #:phases
1223       (modify-phases %standard-phases
1224         (add-after 'unpack 'fix-tests
1225           (lambda* (#:key inputs #:allow-other-keys)
1226             (copy-recursively
1227              (string-append (assoc-ref inputs "glibc-utf8-locales")
1228                             "/lib/locale/") "/tmp/locale")
1229             (for-each make-file-writable (find-files "/tmp"))
1230             (substitute* "tests/make-test-runtime.sh"
1231               (("cp `which.*") "echo guix\n")
1232               (("cp -r /usr/lib/locale/C\\.\\*")
1233                (string-append "mkdir ${DIR}/usr/lib/locale/en_US; \
1234 cp -r /tmp/locale/*/en_US.*")))
1235             (substitute* "tests/libtest.sh"
1236               (("/bin/kill") (which "kill"))
1237               (("/usr/bin/python3") (which "python3")))
1238             #t))
1239         ;; Many tests fail for unknown reasons, so we just run a few basic
1240         ;; tests.
1241         (replace 'check
1242           (lambda _
1243             (setenv "HOME" "/tmp")
1244             (invoke "make" "check"
1245                     "TESTS=tests/test-basic.sh tests/test-config.sh testcommon"))))))
1246     (native-inputs
1247     `(("bison" ,bison)
1248       ("dbus" ,dbus) ; for dbus-daemon
1249       ("gettext" ,gettext-minimal)
1250       ("glib:bin" ,glib "bin")          ; for glib-mkenums + gdbus-codegen
1251       ("glibc-utf8-locales" ,glibc-utf8-locales)
1252       ("gobject-introspection" ,gobject-introspection)
1253       ("libcap" ,libcap)
1254       ("pkg-config" ,pkg-config)
1255       ("python" ,python)
1256       ("python-pyparsing" ,python-pyparsing)
1257       ("socat" ,socat)
1258       ("which" ,which)))
1259    (propagated-inputs `(("glib-networking" ,glib-networking)
1260                         ("gnupg" ,gnupg)
1261                         ("gsettings-desktop-schemas"
1262                          ,gsettings-desktop-schemas)))
1263    (inputs
1264     `(("appstream-glib" ,appstream-glib)
1265       ("bubblewrap" ,bubblewrap)
1266       ("dconf" ,dconf)
1267       ("fuse" ,fuse)
1268       ("gdk-pixbuf" ,gdk-pixbuf)
1269       ("gpgme" ,gpgme)
1270       ("json-glib" ,json-glib)
1271       ("libarchive" ,libarchive)
1272       ("libostree" ,libostree)
1273       ("libseccomp" ,libseccomp)
1274       ("libsoup" ,libsoup)
1275       ("libxau" ,libxau)
1276       ("libxml2" ,libxml2)
1277       ("util-linux" ,util-linux)
1278       ("xdg-dbus-proxy" ,xdg-dbus-proxy)))
1279    (home-page "https://flatpak.org")
1280    (synopsis "System for building, distributing, and running sandboxed desktop
1281 applications")
1282    (description "Flatpak is a system for building, distributing, and running
1283 sandboxed desktop applications on GNU/Linux.")
1284    (license license:lgpl2.1+)))
1285
1286 (define-public akku
1287   (package
1288     (name "akku")
1289     (version "1.0.1")
1290     (source (origin
1291               (method git-fetch)
1292               (uri (git-reference
1293                     (url "https://gitlab.com/akkuscm/akku.git")
1294                     (commit (string-append "v" version))))
1295               (file-name (git-file-name name version))
1296               (sha256 (base32 "1dm32ws3nshnnscd7k75zswxxs1pp25y2q4k8j5ms241hz47by3c"))))
1297     (build-system gnu-build-system)
1298     (arguments
1299      '(#:phases (modify-phases %standard-phases
1300                   (replace 'bootstrap
1301                     (lambda* (#:key outputs #:allow-other-keys)
1302                       (for-each patch-shebang
1303                                 '("bootstrap"
1304                                   ".akku/env"))
1305                       (let* ((home "/tmp")
1306                              (datadir (string-append home "/.local/share/akku/")))
1307                         (mkdir-p datadir)
1308                         (invoke "touch" (string-append datadir "index.db"))
1309                         (setenv "HOME" home))
1310                       (invoke "./bootstrap")
1311                       #t))
1312                   (add-after 'install 'wrap-executables
1313                     (lambda* (#:key outputs inputs #:allow-other-keys)
1314                       (let ((out (assoc-ref outputs "out"))
1315                             (curl (assoc-ref inputs "curl")))
1316                         (wrap-program (string-append out "/bin/akku")
1317                           `("LD_LIBRARY_PATH" ":" prefix (,(string-append curl "/lib"))))
1318                         #t))))))
1319     (native-inputs
1320      `(("which" ,which)
1321        ("autoconf" ,autoconf)
1322        ("automake" ,automake)
1323        ("pkg-config" ,pkg-config)))
1324     (inputs
1325      `(("guile" ,guile-3.0)
1326        ("curl" ,curl)))
1327     (home-page "https://akkuscm.org/")
1328     (synopsis "Language package manager for Scheme")
1329     (description
1330      "Akku.scm is a project-based language package manager for R6RS and R7RS Scheme.
1331 It is mainly meant for programmers who develop portable programs or libraries in Scheme,
1332 but could potentially work for end-users of those programs.  It also has a translator
1333 from R7RS, which allows most R7RS code to run on R6RS implementations.")
1334     (license license:gpl3+)))