[jackhill/guix/guix.git] / gnu / packages / patches / khmer-use-libraries.patch

Change setup.cfg so that the bundled zlib and bzip2 are not used.  This cannot
currently be achieved using "--library z,bz2" as instructed in the setup.py.

diff --git a/setup.cfg b/setup.cfg
index c054092..080992e 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,7 +1,7 @@
 [build_ext]
 define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB
 undef = NO_UNIQUE_RC
-# libraries = z,bz2
+libraries = z,bz2
 ## if using system libraries
 include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
 # include-dirs = lib
Commit	Line	Data
94ff3157 BW	1	Change setup.cfg so that the bundled zlib and bzip2 are not used. This cannot
	2	currently be achieved using "--library z,bz2" as instructed in the setup.py.
	3
	4	diff --git a/setup.cfg b/setup.cfg
	5	index c054092..080992e 100644
	6	--- a/setup.cfg
	7	+++ b/setup.cfg
	8	@@ -1,7 +1,7 @@
	9	[build_ext]
	10	define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB
	11	undef = NO_UNIQUE_RC
	12	-# libraries = z,bz2
	13	+libraries = z,bz2
	14	## if using system libraries
	15	include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
	16	# include-dirs = lib