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1 | ;;; GNU Guix --- Functional package management for GNU |
2 | ;;; Copyright © 2017 Dave Love <fx@gnu.org> | |
3 | ;;; | |
4 | ;;; This file is part of GNU Guix. | |
5 | ;;; | |
6 | ;;; GNU Guix is free software; you can redistribute it and/or modify it | |
7 | ;;; under the terms of the GNU General Public License as published by | |
8 | ;;; the Free Software Foundation; either version 3 of the License, or (at | |
9 | ;;; your option) any later version. | |
10 | ;;; | |
11 | ;;; GNU Guix is distributed in the hope that it will be useful, but | |
12 | ;;; WITHOUT ANY WARRANTY; without even the implied warranty of | |
13 | ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |
14 | ;;; GNU General Public License for more details. | |
15 | ;;; | |
16 | ;;; You should have received a copy of the GNU General Public License | |
17 | ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. | |
18 | ||
19 | (define-module (gnu packages profiling) | |
20 | #:use-module (guix packages) | |
21 | #:use-module ((guix licenses) #:prefix license:) ; avoid zlib, expat clashes | |
22 | #:use-module (guix download) | |
23 | #:use-module (guix utils) | |
24 | #:use-module (guix build-system gnu) | |
25 | #:use-module (gnu packages) | |
26 | #:use-module (gnu packages autotools) | |
27 | #:use-module (gnu packages base) ;for "which" | |
fb993719 | 28 | #:use-module (gnu packages bison) |
a66408f8 DL |
29 | #:use-module (gnu packages compression) |
30 | #:use-module (gnu packages documentation) | |
6a3af24f | 31 | #:use-module (gnu packages fabric-management) |
fb993719 | 32 | #:use-module (gnu packages flex) |
3c8d1f94 | 33 | #:use-module (gnu packages gawk) |
6a3af24f | 34 | #:use-module (gnu packages gcc) |
a66408f8 | 35 | #:use-module (gnu packages glib) |
6a3af24f DL |
36 | #:use-module (gnu packages libunwind) |
37 | #:use-module (gnu packages linux) | |
fb993719 | 38 | #:use-module (gnu packages mpi) |
a6121c0a | 39 | #:use-module (gnu packages ncurses) |
a66408f8 | 40 | #:use-module (gnu packages perl) |
fb993719 | 41 | #:use-module (gnu packages perl) |
a66408f8 DL |
42 | #:use-module (gnu packages python) |
43 | #:use-module (gnu packages qt)) | |
6a3af24f DL |
44 | |
45 | ;; Fixme: Separate out lib and fix resulting cycle errors; separate libpfm | |
46 | ;; output(?); build libmsr and add that component. | |
47 | (define-public papi | |
48 | (package | |
49 | (name "papi") | |
50 | (version "5.5.1") | |
51 | (source | |
52 | (origin | |
53 | (method url-fetch) | |
54 | (uri (string-append "http://icl.utk.edu/projects/papi/downloads/papi-" | |
55 | version ".tar.gz")) | |
56 | (sha256 (base32 "1m62s8fkjjgq04ayf18jcxc33rqfd7nrkdw1gr54q5pn4cijrp29")))) | |
57 | (build-system gnu-build-system) | |
58 | (inputs | |
59 | `(("ncurses" ,ncurses) | |
60 | ("lm-sensors" ,lm-sensors "lib") | |
61 | ("rdma-core" ,rdma-core) | |
62 | ("infiniband-diags" ,infiniband-diags "lib") | |
63 | ("net-tools" ,net-tools))) | |
64 | (native-inputs | |
65 | `(("autoconf" ,autoconf) | |
66 | ("gfortran" ,gfortran))) | |
67 | (arguments | |
68 | '(#:tests? #f ; no check target | |
69 | #:configure-flags | |
70 | ;; These are roughly per Fedora, but elide mx (assumed to be dead, even | |
71 | ;; Open-MX) and add and powercap -- I don't know the pros/cons of | |
72 | ;; infiniband and infiniband_mad, but you can't use them together, and | |
73 | ;; the umad version needs at least one patch. | |
74 | ;; Implicit enabled components: perf_event perf_event_uncore | |
75 | `("--with-perf-events" "--with-shared-lib=yes" "--with-shlib" | |
76 | "--with-static-lib=no" | |
77 | "--with-components=appio coretemp example lustre micpower net rapl \ | |
78 | stealtime lmsensors infiniband powercap" | |
79 | ;; So utils get rpath set correctly: | |
80 | ,(string-append "LDFLAGS=-Xlinker -rpath -Xlinker " | |
81 | (assoc-ref %outputs "out") "/lib")) | |
82 | #:phases | |
83 | (modify-phases %standard-phases | |
84 | (add-before 'configure 'autoconf | |
85 | (lambda _ | |
86 | (chdir "src") | |
87 | (zero? (system* "autoconf")))) | |
88 | ;; Amalgamating with the following clause gives double substitution. | |
89 | (add-before 'patch-source-shebangs 'patch-components | |
90 | (lambda _ | |
91 | (with-directory-excursion "src/components" | |
92 | (substitute* '("lmsensors/configure" "infiniband_umad/configure") | |
93 | (("/bin/sh") (which "sh")))) | |
94 | #t)) | |
95 | (add-after 'configure 'components | |
96 | (lambda* (#:key inputs #:allow-other-keys) | |
97 | (with-directory-excursion "components" | |
98 | (and | |
99 | (with-directory-excursion "infiniband_umad" | |
100 | (zero? (system* "./configure"))) | |
101 | (with-directory-excursion "lmsensors" | |
102 | (let ((base (assoc-ref inputs "lm-sensors"))) | |
103 | (zero? | |
104 | (system* | |
105 | "./configure" | |
106 | (string-append "--with-sensors_incdir=" base | |
107 | "/include/sensors") | |
108 | (string-append "--with-sensors_libdir=" base "/lib"))))))))) | |
109 | (add-after 'install 'extra-doc | |
110 | (lambda* (#:key outputs #:allow-other-keys) | |
111 | (let ((doc (string-append (assoc-ref outputs "out") | |
112 | "/share/doc"))) | |
113 | (mkdir-p doc) | |
114 | (chdir "..") ; we went into src above | |
115 | (for-each (lambda (file) | |
116 | (install-file file doc)) | |
117 | '("README" "RELEASENOTES.txt" "LICENSE.txt")) | |
118 | #t)))))) | |
119 | (home-page "http://icl.cs.utk.edu/papi/") | |
120 | (synopsis "Performance Application Programming Interface") | |
121 | (description | |
122 | "PAPI provides the tool designer and application engineer with a consistent | |
123 | interface and methodology for use of the performance counter hardware found in | |
124 | most major microprocessors. PAPI enables software engineers to see, in near | |
125 | real time, the relation between software performance and processor events. | |
126 | ||
127 | In addition, PAPI provides access to a collection of components that expose | |
128 | performance measurement opportunites across the hardware and software stack.") | |
129 | ;; See Debian papi copyright file. | |
130 | (license (list license:bsd-3 | |
131 | license:lgpl2.1+ ;src/components/infiniband/pscanf.h | |
132 | ;; not used in output | |
133 | license:gpl2+ ;src/components/appio/tests/iozone/gengnuplot.sh | |
134 | ;src/libpfm-3.y/*/multiplex* | |
135 | ;; "BSD-like": src/libpfm-3.y/*, src/libpfm4/* | |
136 | ;; lgpl2.1+: src/perfctr-2.*/* | |
137 | )))) | |
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138 | |
139 | ;; NB. there's a potential name clash with libotf. | |
140 | (define-public otf2 | |
141 | (package | |
142 | (name "otf2") | |
143 | (version "2.1") | |
144 | (source | |
145 | (origin | |
146 | (method url-fetch) | |
147 | (uri (string-append "http://www.vi-hps.org/upload/packages/otf2/otf2-" | |
148 | version ".tar.gz")) | |
149 | (sha256 (base32 "1lyaqhdfaqm1kd23yk71g71vkscw83s7m57j017y768h8sh8xlwa")))) | |
150 | (native-inputs `(("python" ,python))) | |
151 | (outputs '("doc" ; 18MB | |
152 | "lib" | |
153 | "out")) | |
154 | (build-system gnu-build-system) | |
155 | (arguments | |
156 | `(#:configure-flags '("--enable-shared" "--disable-static") | |
157 | #:phases | |
158 | (modify-phases %standard-phases | |
159 | (add-after 'install 'licence | |
160 | (lambda* (#:key outputs #:allow-other-keys) | |
161 | (for-each (lambda (output) | |
162 | (let ((doc (string-append (assoc-ref outputs output) | |
163 | "/share/doc/otf2"))) | |
164 | (install-file "COPYING" doc))) | |
165 | '("lib" "doc")) | |
166 | #t))))) | |
167 | (home-page "http://www.vi-hps.org/projects/score-p/") | |
168 | (synopsis "Open Trace Format 2 library") | |
169 | (description "The Open Trace Format 2 (OTF2) is a scalable, memory | |
170 | efficient event trace data format plus support library.") | |
171 | (license license:bsd-3))) | |
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172 | |
173 | (define-public opari2 | |
174 | (package | |
175 | (name "opari2") | |
176 | (version "2.0.2") | |
177 | (source | |
178 | (origin | |
179 | (method url-fetch) | |
180 | (uri (let* ((parts (string-split version #\.) ) | |
181 | (major (car parts)) | |
182 | (minor (cadr parts))) | |
183 | (string-append "http://www.vi-hps.org/upload/packages/opari2/opari2-" | |
184 | version ".tar.gz"))) | |
185 | (sha256 (base32 "1ph8l5c646bm9l5vcn8rrbjvkyi7y8yvn2ny95r6kmlzs766g3q8")))) | |
186 | (build-system gnu-build-system) | |
187 | (inputs `(("gfortran" ,gfortran))) | |
188 | (native-inputs `(("gawk" ,gawk) ;for tests | |
189 | ("which" ,which))) | |
190 | (arguments | |
191 | `(#:phases | |
192 | (modify-phases %standard-phases | |
193 | (add-after 'install 'licence | |
194 | (lambda* (#:key outputs #:allow-other-keys) | |
195 | (let ((doc (string-append (assoc-ref outputs "out") | |
196 | "/share/doc/opari2"))) | |
197 | (install-file "COPYING" doc) | |
198 | #t)))))) | |
199 | (home-page "http://www.vi-hps.org/projects/score-p") | |
200 | (synopsis "OpenMP runtime performance measurement instrumenter") | |
201 | (description "OPARI2 is a source-to-source instrumentation tool for OpenMP | |
202 | and hybrid codes. It surrounds OpenMP directives and runtime library calls | |
203 | with calls to the POMP2 measurement interface.") | |
204 | (license license:bsd-3))) | |
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205 | |
206 | (define-public cube | |
207 | (package | |
208 | (name "cube") | |
209 | (version "4.3.5") | |
210 | (source | |
211 | (origin | |
212 | (method url-fetch) | |
213 | (uri (string-append | |
214 | "http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-" | |
215 | version ".tar.gz")) | |
216 | (sha256 (base32 "04irflia4rfw02093w9nx7rr98r640y4q8hisjywvd4b7r3nzhhx")) | |
217 | (patches (search-patches "cube-nocheck.patch")))) | |
218 | (inputs `(("dbus" ,dbus) | |
219 | ("zlib" ,zlib))) | |
220 | (native-inputs `(("perl" ,perl) | |
221 | ("qtbase" ,qtbase) ; native because of qmake | |
222 | ("which" ,which))) | |
223 | ||
224 | ;; FIXME: The doc is 14MB, but adding a doc output results in a cycle. | |
225 | (outputs '("out" ;"doc" | |
226 | "lib")) | |
227 | ||
228 | (build-system gnu-build-system) | |
229 | (arguments | |
230 | `(#:configure-flags | |
231 | `("--enable-shared" "--disable-static" "--disable-silent-rules" | |
232 | ,(string-append "LDFLAGS=-L" (assoc-ref %outputs "lib") "/lib")) | |
233 | #:parallel-tests? #f | |
234 | #:phases | |
235 | (modify-phases %standard-phases | |
236 | (add-after 'configure 'rpath | |
237 | ;; Account for moving GUI stuff | |
238 | (lambda* (#:key outputs #:allow-other-keys) | |
239 | (let ((wl (string-append "-Wl,-rpath=" (assoc-ref outputs "out") | |
240 | "/lib"))) | |
241 | (substitute* "build-backend/Makefile" | |
242 | (("^cube_LDFLAGS =") (string-append "cube_LDFLAGS = " wl)) | |
243 | (("^libheatmap_plugin_la_LDFLAGS =") | |
244 | (string-append "libheatmap_plugin_la_LDFLAGS = " wl)) | |
245 | (("^libbarplot_plugin_la_LDFLAGS =") | |
246 | (string-append "libbarplot_plugin_la_LDFLAGS = " wl))) | |
247 | #t))) | |
248 | (add-before 'install 'includes-cube | |
249 | ;; It tries to install here before include exists. | |
250 | (lambda* (#:key outputs #:allow-other-keys) | |
251 | (let ((inc (string-append (assoc-ref outputs "lib") "/include"))) | |
252 | (mkdir-p (string-append inc "/cube")) | |
253 | (mkdir-p (string-append inc "/cubew")) | |
254 | #t))) | |
255 | (add-after 'install 'licence | |
256 | (lambda* (#:key outputs #:allow-other-keys) | |
257 | (let ((doc (string-append (assoc-ref outputs "lib") | |
258 | "/share/doc/cube"))) | |
259 | (install-file "COPYING" doc) | |
260 | #t))) | |
261 | ;; XXX: Commented due to cycle (see comment above.) | |
262 | ;; (add-after 'install 'doc | |
263 | ;; (lambda _ | |
264 | ;; (let ((share (string-append (assoc-ref %outputs "doc") | |
265 | ;; "/share"))) | |
266 | ;; (mkdir-p share) | |
267 | ;; (rename-file (string-append %output "/share/doc") | |
268 | ;; (string-append share "/doc"))))) | |
269 | (add-after 'install 'gui-stuff | |
270 | ;; Get the Qt horror dependencies out of the lib closure | |
271 | (lambda _ | |
272 | (let ((outlib (string-append (assoc-ref %outputs "out") "/lib")) | |
273 | (lib (string-append (assoc-ref %outputs "lib") "/lib"))) | |
274 | (mkdir-p outlib) | |
275 | (rename-file (string-append lib "/cube-plugins") | |
276 | (string-append outlib "/cube-plugins")) | |
277 | (for-each (lambda (file) | |
278 | (rename-file | |
279 | file (string-append outlib "/" (basename file)))) | |
280 | (append (find-files lib "libgraphwidgetcommon-plugin\\..*") | |
281 | (find-files lib "libcube4gui\\.so.*"))) | |
282 | #t))) | |
283 | (add-after 'install 'move-include | |
284 | ;; Most of the headers end up under %output for some reason, | |
285 | ;; despite --includedir in configure. | |
286 | (lambda* (#:key outputs #:allow-other-keys) | |
287 | (let ((outinc (string-append (assoc-ref outputs "out") | |
288 | "/include")) | |
289 | (libinc (string-append (assoc-ref outputs "lib") | |
290 | "/include"))) | |
291 | (for-each (lambda (file) | |
292 | (let ((from (string-append outinc "/" file))) | |
293 | (copy-recursively from libinc) | |
294 | (delete-file-recursively from))) | |
295 | '("cube" "cubew")) | |
296 | #t))) | |
297 | ||
298 | ;; XXX: This doesn't work because cube-config, which is needed for | |
299 | ;; building stuff, sources cube-config-frontend. We don't want that | |
300 | ;; in the lib output because it pulls in >1GB via QT. | |
301 | ;; | |
302 | ;; (add-after 'install 'cube-config | |
303 | ;; (lambda _ | |
304 | ;; (let* ((lib (assoc-ref %outputs "lib")) | |
305 | ;; (libbin (string-append lib "/bin"))) | |
306 | ;; (mkdir-p libbin) | |
307 | ;; (system (string-append "mv " (assoc-ref %outputs "out") | |
308 | ;; "/bin/cube-config* " libbin)) | |
309 | ;; (substitute* (list (string-append libbin "/cube-config")) | |
310 | ;; (("^prefix=.*") (string-append "prefix=" lib)) | |
311 | ;; (("^exec_prefix=\"\\$\\{prefix\\}\"") | |
312 | ;; (string-append "exec_prefix=" lib)))))) | |
313 | (add-after 'install 'cube-config | |
314 | (lambda* (#:key outputs #:allow-other-keys) | |
315 | (let* ((lib (assoc-ref outputs "lib")) | |
316 | (libbin (string-append lib "/bin"))) | |
317 | (mkdir-p libbin) | |
318 | (install-file (string-append %output "/bin/cube-config") libbin) | |
319 | (install-file (string-append %output "/bin/cube-config-backend") | |
320 | libbin) | |
321 | (substitute* (list (string-append libbin "/cube-config")) | |
322 | (("^source .*frontend.*$") "") | |
323 | (((assoc-ref outputs "out")) lib)) | |
324 | #t)))))) | |
325 | (home-page "http://www.scalasca.org/software/cube-4.x/download.html") | |
326 | (synopsis "Performance report explorer for parallel programs") | |
327 | (description | |
328 | "CUBE (CUBE Uniform Behavioral Encoding) is a tool to display a variety | |
329 | of performance metrics for parallel programs including MPI and OpenMP | |
330 | applications. CUBE allows interactive exploration of a multidimensional | |
331 | performance space in a scalable fashion. Scalability is achieved in two ways: | |
332 | hierarchical decomposition of individual dimensions and aggregation across | |
333 | different dimensions. All performance metrics are uniformly accommodated in | |
334 | the same display and thus provide the ability to easily compare the effects of | |
335 | different kinds of performance behavior.") | |
336 | (license license:bsd-3))) | |
fb993719 DL |
337 | |
338 | (define (make-scorep mpi) | |
339 | (package | |
340 | (name (string-append "scorep-" (package-name mpi))) | |
341 | (version "3.1") | |
342 | (source (origin | |
343 | (method url-fetch) | |
344 | (uri (string-append | |
345 | "http://www.vi-hps.org/upload/packages/scorep/scorep-" | |
346 | version ".tar.gz")) | |
347 | (sha256 | |
348 | (base32 | |
349 | "0h45357djna4dn9jyxx0n36fhhms3jrf22988m9agz1aw2jfivs9")) | |
350 | (modules '((guix build utils))) | |
351 | (snippet | |
352 | ;; Remove bundled software. | |
353 | '(for-each delete-file-recursively | |
354 | '("vendor/opari2" "vendor/cube"))))) | |
355 | (build-system gnu-build-system) | |
356 | (inputs | |
357 | `(("mpi" ,mpi) | |
358 | ("papi" ,papi) | |
359 | ("opari2" ,opari2) | |
360 | ("libunwind" ,libunwind) | |
361 | ("otf2" ,otf2) | |
362 | ("cubelib" ,cube "lib") ;for lib, include | |
363 | ("openmpi" ,openmpi) | |
364 | ("zlib" ,zlib))) | |
365 | (native-inputs | |
366 | `(("gfortran" ,gfortran) | |
367 | ("flex" ,flex) | |
368 | ("cube" ,cube) ;for cube-config | |
369 | ("bison" ,bison) | |
370 | ("python" ,python) | |
371 | ("doxygen" ,doxygen) | |
372 | ("which" ,which))) | |
373 | (arguments | |
374 | `(#:configure-flags | |
375 | (list "--enable-shared" "--disable-static" | |
376 | (string-append "--with-opari2=" | |
377 | (assoc-ref %build-inputs "opari2")) | |
378 | (string-append "--with-cube=" | |
379 | (assoc-ref %build-inputs "cube"))) | |
380 | #:parallel-tests? #f | |
381 | #:make-flags '("V=1") | |
382 | #:phases | |
383 | (modify-phases %standard-phases | |
384 | (add-after 'install 'licence | |
385 | (lambda* (#:key outputs #:allow-other-keys) | |
386 | (let ((doc (string-append (assoc-ref outputs "out") | |
387 | "/share/doc/scorep"))) | |
388 | (install-file "COPYING" doc) | |
389 | #t)))))) | |
390 | (home-page "http://www.vi-hps.org/projects/score-p/") | |
391 | (synopsis "Performance measurement infrastructure for parallel code") | |
392 | (description | |
393 | "The Score-P (Scalable Performance Measurement Infrastructure for | |
394 | Parallel Codes) measurement infrastructure is a scalable and easy-to-use tool | |
395 | suite for profiling, event trace recording, and online analysis of | |
396 | high-performance computing (HPC) applications.") | |
397 | (license license:cpl1.0))) | |
398 | ||
399 | (define-public scorep-openmpi (make-scorep openmpi)) |