gnu: python-pandas: Fix build on 32-bit.
[jackhill/guix/guix.git] / gnu / packages / databases.scm
CommitLineData
5f96f303 1;;; GNU Guix --- Functional package management for GNU
ff1f39e3 2;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org>
b86c013c 3;;; Copyright © 2012, 2014, 2015 Andreas Enge <andreas@enge.fr>
5f96f303 4;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com>
218a2106 5;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
8047d13d 6;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
e61fd0f0 7;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
77631745 8;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
b747a9db 9;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
b2476513 10;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
bdc11dc4 11;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
4c6aa73b 12;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
0e1b262e 13;;; Copyright © 2016 David Craven <david@craven.ch>
fe71eee0 14;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
62ea44fc 15;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
b9f771a7 16;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
259a94e9 17;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
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18;;;
19;;; This file is part of GNU Guix.
20;;;
21;;; GNU Guix is free software; you can redistribute it and/or modify it
22;;; under the terms of the GNU General Public License as published by
23;;; the Free Software Foundation; either version 3 of the License, or (at
24;;; your option) any later version.
25;;;
26;;; GNU Guix is distributed in the hope that it will be useful, but
27;;; WITHOUT ANY WARRANTY; without even the implied warranty of
28;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
29;;; GNU General Public License for more details.
30;;;
31;;; You should have received a copy of the GNU General Public License
32;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
33
34(define-module (gnu packages databases)
35 #:use-module (gnu packages)
06a035db 36 #:use-module (gnu packages algebra)
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37 #:use-module (gnu packages autotools)
38 #:use-module (gnu packages avahi)
77e52190 39 #:use-module (gnu packages base)
b747a9db 40 #:use-module (gnu packages bash)
06a035db 41 #:use-module (gnu packages bison)
23bbd7dd 42 #:use-module (gnu packages boost)
06a035db
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43 #:use-module (gnu packages check)
44 #:use-module (gnu packages compression)
62ea44fc 45 #:use-module (gnu packages crypto)
06a035db
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46 #:use-module (gnu packages curl)
47 #:use-module (gnu packages cyrus-sasl)
48 #:use-module (gnu packages emacs)
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49 #:use-module (gnu packages gettext)
50 #:use-module (gnu packages glib)
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51 #:use-module (gnu packages gnupg)
52 #:use-module (gnu packages jemalloc)
708155df 53 #:use-module (gnu packages language)
5f96f303 54 #:use-module (gnu packages linux)
5f96f303 55 #:use-module (gnu packages ncurses)
d3c6ad0a 56 #:use-module (gnu packages parallel)
77631745 57 #:use-module (gnu packages pcre)
06a035db 58 #:use-module (gnu packages perl)
4c6aa73b 59 #:use-module (gnu packages pkg-config)
d3c6ad0a 60 #:use-module (gnu packages popt)
06a035db 61 #:use-module (gnu packages python)
4c6aa73b 62 #:use-module (gnu packages rdf)
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63 #:use-module (gnu packages readline)
64 #:use-module (gnu packages tcl)
65 #:use-module (gnu packages tls)
77631745 66 #:use-module (gnu packages xml)
0e1b262e 67 #:use-module ((guix licenses) #:prefix license:)
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68 #:use-module (guix packages)
69 #:use-module (guix download)
70 #:use-module (guix build-system gnu)
274da61d 71 #:use-module (guix build-system perl)
4d98bfaf 72 #:use-module (guix build-system python)
77631745 73 #:use-module (guix build-system cmake)
329d13b8 74 #:use-module (guix utils)
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75 #:use-module (srfi srfi-26)
76 #:use-module (ice-9 match))
77
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78(define-public 4store
79 (package
80 (name "4store")
81 (version "1.1.6")
82 (source (origin
83 (method url-fetch)
84 (uri (string-append "https://github.com/garlik/4store/archive/v"
85 version ".tar.gz"))
86 (file-name (string-append name "-" version ".tar.gz"))
87 (sha256
88 (base32 "004fmcf1w75zhc1x3zc6kc97j4jqn2v5nhk6yb3z3cpfrhzi9j50"))
89 (patches (list (search-patch "4store-fix-buildsystem.patch")))))
90 (build-system gnu-build-system)
91 (native-inputs
92 `(("perl" ,perl)
93 ("python" ,python-2)
94 ("autoconf" ,autoconf)
95 ("automake" ,automake)
b94a6ca0 96 ("gettext" ,gettext-minimal)
4c6aa73b 97 ("libtool" ,libtool)
74c8b174 98 ("pcre" ,pcre "bin") ;for 'pcre-config'
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99 ("pkg-config" ,pkg-config)))
100 (inputs
101 `(("glib" ,glib)
102 ("rasqal" ,rasqal)
103 ("libxml2" ,libxml2)
104 ("raptor2" ,raptor2)
105 ("readline" ,readline)
106 ("avahi" ,avahi)
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107 ("cyrus-sasl" ,cyrus-sasl)
108 ("openssl" ,openssl)
109 ("util-linux" ,util-linux)))
110 (arguments
111 `(#:phases
112 (modify-phases %standard-phases
113 (add-before 'configure 'generate-configure
114 (lambda _
115 (zero? (system* "./autogen.sh")))))))
116 ;; http://www.4store.org has been down for a while now.
117 (home-page "https://github.com/garlik/4store")
118 (synopsis "Clustered RDF storage and query engine")
119 (description "4store is a RDF/SPARQL store written in C, supporting
120either single machines or networked clusters.")
ba8b9f8d 121 (license license:gpl3+)))
4c6aa73b 122
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123(define-public gdbm
124 (package
125 (name "gdbm")
2135d1eb 126 (version "1.12")
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127 (source (origin
128 (method url-fetch)
129 (uri (string-append "mirror://gnu/gdbm/gdbm-"
130 version ".tar.gz"))
131 (sha256
132 (base32
2135d1eb 133 "1smwz4x5qa4js0zf1w3asq6z7mh20zlgwbh2bk5dczw6xrk22yyr"))))
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134 (arguments `(#:configure-flags '("--enable-libgdbm-compat")))
135 (build-system gnu-build-system)
136 (home-page "http://www.gnu.org/software/gdbm/")
137 (synopsis
138 "Hash library of database functions compatible with traditional dbm")
139 (description
140 "GDBM is a library for manipulating hashed databases. It is used to
141store key/value pairs in a file in a manner similar to the Unix dbm library
142and provides interfaces to the traditional file format.")
ba8b9f8d 143 (license license:gpl3+)))
b416aadf 144
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145(define-public bdb
146 (package
147 (name "bdb")
18e681bf 148 (version "6.2.23")
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149 (source (origin
150 (method url-fetch)
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151 (uri (string-append "http://download.oracle.com/berkeley-db/db-"
152 version ".tar.gz"))
153 (sha256
154 (base32
155 "1isxx4jfmnh913jzhp8hhfngbk6dsg46f4kjpvvc56maj64jqqa7"))))
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156 (build-system gnu-build-system)
157 (outputs '("out" ; programs, libraries, headers
158 "doc")) ; 94 MiB of HTML docs
159 (arguments
160 '(#:tests? #f ; no check target available
ff1f39e3 161 #:disallowed-references ("doc")
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162 #:phases
163 (alist-replace
164 'configure
165 (lambda* (#:key outputs #:allow-other-keys)
166 (let ((out (assoc-ref outputs "out"))
167 (doc (assoc-ref outputs "doc")))
168 ;; '--docdir' is not honored, so we need to patch.
169 (substitute* "dist/Makefile.in"
170 (("docdir[[:blank:]]*=.*")
171 (string-append "docdir = " doc "/share/doc/bdb")))
5f96f303 172
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173 (zero?
174 (system* "./dist/configure"
175 (string-append "--prefix=" out)
176 (string-append "CONFIG_SHELL=" (which "bash"))
177 (string-append "SHELL=" (which "bash"))
5f96f303 178
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179 ;; Remove 7 MiB of .a files.
180 "--disable-static"
181
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182 ;; The compatibility mode is needed by some packages,
183 ;; notably iproute2.
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184 "--enable-compat185"
185
186 ;; The following flag is needed so that the inclusion
187 ;; of db_cxx.h into C++ files works; it leads to
188 ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
189 "--enable-cxx"))))
5f96f303 190 %standard-phases)))
35b9e423 191 (synopsis "Berkeley database")
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192 (description
193 "Berkeley DB is an embeddable database allowing developers the choice of
194SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
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195 ;; Starting with version 6, BDB is distributed under AGPL3. Many individual
196 ;; files are covered by the 3-clause BSD license.
ba8b9f8d 197 (license (list license:agpl3+ license:bsd-3))
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198 (home-page
199 "http://www.oracle.com/us/products/database/berkeley-db/overview/index.html")))
200
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201(define-public bdb-5.3
202 (package (inherit bdb)
203 (name "bdb")
204 (version "5.3.28")
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205 (license (license:non-copyleft "file://LICENSE"
206 "See LICENSE in the distribution."))
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207 (source (origin
208 (method url-fetch)
209 (uri (string-append "http://download.oracle.com/berkeley-db/db-"
210 version ".tar.gz"))
211 (sha256
212 (base32
213 "0a1n5hbl7027fbz5lm0vp0zzfp1hmxnz14wx3zl9563h83br5ag0"))))))
214
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215(define-public leveldb
216 (package
217 (name "leveldb")
04c88363 218 (version "1.20")
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219 (source (origin
220 (method url-fetch)
221 (uri (string-append "https://github.com/google/leveldb"
222 "/archive/v" version ".tar.gz"))
223 (file-name (string-append name "-" version ".tar.gz"))
224 (sha256
225 (base32
04c88363 226 "0r36bcrj6b2afsp4aw1gjai3jbs1c7734pxpc1jz7hh9nasyiazm"))))
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227 (build-system gnu-build-system)
228 (arguments
229 '(#:make-flags (list "CC=gcc")
230 #:phases
231 (modify-phases %standard-phases
232 (delete 'configure)
233 (replace 'install
234 ;; There is no install target, so we do it here.
235 (lambda* (#:key outputs #:allow-other-keys)
236 (let* ((out (assoc-ref outputs "out"))
237 (lib (string-append out "/lib"))
238 (include (string-append out "/include")))
239 (for-each (lambda (file)
240 (install-file file lib))
241 (find-files "out-shared" "^libleveldb\\.so.*$"))
242 (copy-recursively "include" include)
243 #t))))))
244 (inputs
245 `(("snappy" ,snappy)))
246 (home-page "http://leveldb.org/")
247 (synopsis "Fast key-value storage library")
248 (description
249 "LevelDB is a fast key-value storage library that provides an ordered
250mapping from string keys to string values.")
ba8b9f8d 251 (license license:bsd-3)))
b9f771a7 252
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253(define-public mysql
254 (package
255 (name "mysql")
e63b19f5 256 (version "5.7.17")
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257 (source (origin
258 (method url-fetch)
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259 (uri (list (string-append
260 "http://dev.mysql.com/get/Downloads/MySQL-"
261 (version-major+minor version) "/"
262 name "-" version ".tar.gz")
263 (string-append
264 "http://downloads.mysql.com/archives/get/file/"
265 name "-" version ".tar.gz")))
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266 (sha256
267 (base32
e63b19f5 268 "0lcn9cm36n14g22bcppq5vf4nxbrl3khvlsp9hsixqdfb3l27gyf"))))
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269 (build-system cmake-build-system)
270 (arguments
69419655 271 `(#:configure-flags
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272 '("-DBUILD_CONFIG=mysql_release"
273 "-DWITH_SSL=system"
274 "-DWITH_ZLIB=system"
275 "-DDEFAULT_CHARSET=utf8"
276 "-DDEFAULT_COLLATION=utf8_general_ci"
277 "-DMYSQL_DATADIR=/var/lib/mysql"
278 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
279 "-DINSTALL_INFODIR=share/mysql/docs"
280 "-DINSTALL_MANDIR=share/man"
281 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
282 "-DINSTALL_SCRIPTDIR=bin"
283 "-DINSTALL_INCLUDEDIR=include/mysql"
284 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
285 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
286 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
287 "-DINSTALL_DOCDIR=share/mysql/docs"
288 "-DINSTALL_SHAREDIR=share/mysql"
289 ;; Get rid of test data.
290 "-DINSTALL_MYSQLTESTDIR="
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291 "-DINSTALL_SQLBENCHDIR=")
292 #:phases (modify-phases %standard-phases
293 (add-after
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294 'unpack 'patch-boost-version
295 (lambda _
296 ;; Mysql wants boost-1.59.0 specifically
297 (substitute* "cmake/boost.cmake"
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298 (("59")
299 ,(match (string-split (package-version boost) #\.)
300 ((_ minor . _) minor))))))
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301 (add-after
302 'install 'remove-extra-binaries
303 (lambda* (#:key outputs #:allow-other-keys)
304 (let ((out (assoc-ref outputs "out")))
305 ;; Remove the 3 *_embedded files, which weigh in at
306 ;; 14 MiB each.
307 (for-each delete-file
308 (find-files (string-append out "/bin")
309 "_embedded$"))
3f289db6 310 #t))))))
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311 (native-inputs
312 `(("bison" ,bison)
313 ("perl" ,perl)))
5f96f303 314 (inputs
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315 `(("boost" ,boost)
316 ("libaio" ,libaio)
317 ("ncurses" ,ncurses)
5f96f303 318 ("openssl" ,openssl)
23bbd7dd 319 ("zlib" ,zlib)))
5f96f303 320 (home-page "http://www.mysql.com/")
9e771e3b 321 (synopsis "Fast, easy to use, and popular database")
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322 (description
323 "MySQL is a fast, reliable, and easy to use relational database
324management system that supports the standardized Structured Query
325Language.")
ba8b9f8d 326 (license license:gpl2)))
5f96f303 327
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328(define-public mariadb
329 (package
330 (name "mariadb")
10a87469 331 (version "10.1.21")
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332 (source (origin
333 (method url-fetch)
334 (uri (string-append "https://downloads.mariadb.org/f/"
335 name "-" version "/source/"
336 name "-" version ".tar.gz"))
337 (sha256
338 (base32
10a87469 339 "144lcm5awcf0k6a7saqfr4p2kg8r5wbdhdm4cmn2m8hyg1an70as"))))
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340 (build-system cmake-build-system)
341 (arguments
342 '(#:configure-flags
343 '("-DBUILD_CONFIG=mysql_release"
344 "-DDEFAULT_CHARSET=utf8"
345 "-DDEFAULT_COLLATION=utf8_general_ci"
346 "-DMYSQL_DATADIR=/var/lib/mysql"
347 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
348 "-DINSTALL_INFODIR=share/mysql/docs"
349 "-DINSTALL_MANDIR=share/man"
350 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
351 "-DINSTALL_SCRIPTDIR=bin"
352 "-DINSTALL_INCLUDEDIR=include/mysql"
353 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
354 "-DINSTALL_SUPPORTFILESDIR=share/mysql/support-files"
355 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
356 "-DINSTALL_DOCDIR=share/mysql/docs"
357 "-DINSTALL_SHAREDIR=share/mysql")
358 #:phases
359 (modify-phases %standard-phases
360 (add-before
361 'configure 'pre-configure
362 (lambda _
363 (setenv "CONFIG_SHELL" (which "sh"))
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364 #t))
365 (add-after
366 'install 'post-install
367 (lambda* (#:key outputs #:allow-other-keys)
368 (let* ((out (assoc-ref outputs "out"))
369 (test (assoc-ref outputs "test")))
370 (substitute* (string-append out "/bin/mysql_install_db")
371 (("basedir=\"\"")
372 (string-append "basedir=\"" out "\"")))
373 ;; Remove unneeded files for testing.
374 (with-directory-excursion out
375 (for-each delete-file-recursively
376 '("data" "mysql-test" "sql-bench"
377 "share/man/man1/mysql-test-run.pl.1")))))))))
378 (native-inputs
379 `(("bison" ,bison)
380 ("perl" ,perl)))
381 (inputs
382 `(("jemalloc" ,jemalloc)
383 ("libaio" ,libaio)
384 ("libxml2" ,libxml2)
385 ("ncurses" ,ncurses)
386 ("openssl" ,openssl)
387 ("pcre" ,pcre)
388 ("zlib" ,zlib)))
389 (home-page "https://mariadb.org/")
390 (synopsis "SQL database server")
391 (description
392 "MariaDB is a multi-user and multi-threaded SQL database server, designed
393as a drop-in replacement of MySQL.")
ba8b9f8d 394 (license license:gpl2)))
77631745 395
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396(define-public postgresql
397 (package
398 (name "postgresql")
83f805be 399 (version "9.5.6")
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400 (source (origin
401 (method url-fetch)
dbeaf8f2 402 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
9020890b 403 version "/postgresql-" version ".tar.bz2"))
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404 (sha256
405 (base32
83f805be 406 "0bz1b9r249ffjfvldaiah2g78ccwq30ddh8hdvlq61z26inmz7mv"))))
5f96f303 407 (build-system gnu-build-system)
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408 (arguments
409 `(#:phases
410 (modify-phases %standard-phases
411 (add-before 'configure 'patch-/bin/sh
412 (lambda _
413 ;; Refer to the actual shell.
414 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
415 "src/bin/psql/command.c")
416 (("/bin/sh") (which "sh")))
417 #t)))))
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418 (inputs
419 `(("readline" ,readline)
420 ("zlib" ,zlib)))
d887f420 421 (home-page "https://www.postgresql.org/")
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422 (synopsis "Powerful object-relational database system")
423 (description
424 "PostgreSQL is a powerful object-relational database system. It is fully
425ACID compliant, has full support for foreign keys, joins, views, triggers, and
426stored procedures (in multiple languages). It includes most SQL:2008 data
427types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
428TIMESTAMP. It also supports storage of binary large objects, including
429pictures, sounds, or video.")
ba8b9f8d 430 (license (license:x11-style "file://COPYRIGHT"))))
5f96f303 431
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432(define-public qdbm
433 (package
434 (name "qdbm")
435 (version "1.8.78")
436 (source
437 (origin
438 (method url-fetch)
439 (uri (string-append "http://fallabs.com/" name "/"
440 name "-" version ".tar.gz"))
441 (sha256
442 (base32
443 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
444 (build-system gnu-build-system)
445 (arguments
446 `( #:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
447 (assoc-ref %outputs "out")
448 "/lib"))))
449 (home-page "http://fallabs.com/qdbm")
450 (synopsis "Key-value database")
451 (description "QDBM is a library of routines for managing a
452database. The database is a simple data file containing key-value
453pairs. Every key and value is serial bytes with variable length.
454Binary data as well as character strings can be used as a key or a
455value. There is no concept of data tables or data types. Records are
456organized in a hash table or B+ tree.")
457 (license license:lgpl2.1+)))
458
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459(define-public recutils
460 (package
461 (name "recutils")
462 (version "1.7")
463 (source (origin
464 (method url-fetch)
465 (uri (string-append "mirror://gnu/recutils/recutils-"
466 version ".tar.gz"))
467 (sha256
468 (base32
469 "0cdwa4094x3yx7vn98xykvnlp9rngvd58d19vs3vh5hrvggccg93"))))
470 (build-system gnu-build-system)
471
472 ;; Running tests in parallel leads to test failures and crashes in
473 ;; torture/utils.
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474 (arguments '(#:parallel-tests? #f
475 #:configure-flags
476 (list (string-append "--with-bash-headers="
477 (assoc-ref %build-inputs "bash:include")
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478 "/include/bash"))
479
480 #:phases (modify-phases %standard-phases
481 (add-before 'build 'set-bash4.4-header-location
482 (lambda _
483 (substitute* "bash/Makefile.in"
484 ;; Adjust the header search path for Bash
485 ;; 4.4 in accordance with 'bash.pc'.
486 (("AM_CPPFLAGS = (.*)$" _ rest)
487 (string-append "AM_CPPFLAGS = "
488 "-I$(BASH_HEADERS)/include "
489 rest))
490
491 ;; Install to PREFIX/lib/bash to match Bash
492 ;; 4.4's search path.
493 (("^libdir = .*$")
494 "libdir = @libdir@/bash\n"))
495 #t)))))
5f96f303 496
b8fc3622 497 (native-inputs `(("emacs" ,emacs-minimal)
7ae7ca0e 498 ("bc" ,bc)
b747a9db 499 ("bash:include" ,bash "include")
b3546174 500 ("libuuid" ,util-linux)))
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501
502 ;; TODO: Add more optional inputs.
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503 (inputs `(("curl" ,curl)
504 ("libgcrypt" ,libgcrypt)
505 ("check" ,check)))
506 (synopsis "Manipulate plain text files as databases")
507 (description
508 "GNU Recutils is a set of tools and libraries for creating and
509manipulating text-based, human-editable databases. Despite being text-based,
510databases created with Recutils carry all of the expected features such as
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511unique fields, primary keys, time stamps and more. Many different field
512types are supported, as is encryption.")
ba8b9f8d 513 (license license:gpl3+)
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514 (home-page "http://www.gnu.org/software/recutils/")))
515
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516(define-public rocksdb
517 (package
518 (name "rocksdb")
b9fb6b8a 519 (version "5.1.4")
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520 (source (origin
521 (method url-fetch)
522 (uri (string-append "https://github.com/facebook/rocksdb"
523 "/archive/v" version ".tar.gz"))
524 (file-name (string-append name "-" version ".tar.gz"))
525 (sha256
526 (base32
b9fb6b8a 527 "0ddyj8lh5jk6vx675pdg4jhgs7c12ckw5j31rz85jlrds68ygrry"))
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528 (modules '((guix build utils)))
529 (snippet
530 '(begin
531 ;; TODO: unbundle gtest.
532 (delete-file "build_tools/gnu_parallel")
533 #t))))
534 (build-system gnu-build-system)
535 (arguments
536 '(#:make-flags (list "CC=gcc"
537 ;; Make the resulting library position-independent so the
538 ;; static version can be included in shared objects.
539 "EXTRA_CXXFLAGS=-fPIC"
540 (string-append "INSTALL_PATH="
541 (assoc-ref %outputs "out")))
542 #:phases
543 (modify-phases %standard-phases
544 (add-after 'unpack 'patch-Makefile
545 (lambda _
546 (substitute* "Makefile"
547 (("build_tools/gnu_parallel") "parallel")
548 (("#!/bin/sh") (string-append "#!" (which "sh"))))
549 #t))
550 (delete 'configure)
551 (add-before 'check 'disable-failing-tests
552 (lambda _
553 (substitute* "Makefile"
554 ;; These tests reliably fail due to "Too many open files".
555 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
556 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
557 #t))
558 (add-after
559 'check 'build-release-libraries
560 ;; The 'check' target depends on the default target which is compiled
561 ;; with debug symbols. The 'install' target depends on shared and
562 ;; static release targets so we build them here for clarity.
563 ;; TODO: Add debug output.
564 (lambda* (#:key (make-flags '()) #:allow-other-keys)
565 ;; Prevent the build from adding machine-specific optimizations.
566 ;; This does not work if passed as a make flag...
567 (setenv "PORTABLE" "1")
568 (and (zero? (apply system* "make" "static_lib" make-flags))
569 (zero? (apply system* "make" "shared_lib" make-flags)))))
570 (add-after 'install 'delete-static-library
571 (lambda* (#:key outputs #:allow-other-keys)
572 (let* ((out (assoc-ref outputs "out"))
573 (lib (string-append out "/lib")))
574 (for-each (lambda (file)
575 (delete-file file))
576 (find-files lib "\\.l?a$"))
577 #t))))))
578 (native-inputs
579 `(("parallel" ,parallel)
580 ("perl" ,perl)
581 ("procps" ,procps)
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582 ("python" ,python-2)
583 ("which" ,which)))
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584 (inputs
585 `(("bzip2" ,bzip2)
586 ("gflags" ,gflags)
587 ("jemalloc" ,jemalloc)
588 ("lz4" ,lz4)
589 ("snappy" ,snappy)
590 ("zlib" ,zlib)))
591 (home-page "http://rocksdb.org/")
592 (synopsis "Persistent key-value store for fast storage")
593 (description
594 "RocksDB is a library that forms the core building block for a fast
595key-value server, especially suited for storing data on flash drives. It
596has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
597between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
598(RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
599compactions, making it specially suitable for storing multiple terabytes of
600data in a single database. RocksDB is partially based on @code{LevelDB}.")
601 ;; RocksDB is BSD-3 and the JNI adapter is Apache 2.0.
ba8b9f8d 602 (license (list license:bsd-3 license:asl2.0))))
d3c6ad0a 603
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604(define-public sparql-query
605 (package
606 (name "sparql-query")
607 (version "1.1")
608 (source (origin
609 (method url-fetch)
610 (uri (string-append "https://github.com/tialaramex/"
611 name "/archive/" version ".tar.gz"))
612 (sha256
613 (base32 "0yq3k20472rv8npcc420q9ab6idy584g5y0q501d360k5q0ggr8w"))
614 (file-name (string-append name "-" version ".tar.gz"))))
615 (build-system gnu-build-system)
616 (inputs
617 `(("readline" ,readline)
618 ("ncurses" ,ncurses)
619 ("glib" ,glib)
620 ("libxml2" ,libxml2)
621 ("curl" ,curl)))
622 (native-inputs
623 `(("pkg-config" ,pkg-config)))
624 (arguments
625 `(#:make-flags '("CC=gcc")
626 #:phases
627 (modify-phases %standard-phases
628 (delete 'configure)
629 ;; The Makefile uses git to obtain versioning information. This phase
630 ;; substitutes the git invocation with the package version.
631 (add-after 'unpack 'remove-git-dependency
632 (lambda _
633 (substitute* "Makefile"
634 (("^gitrev :=.*$")
635 (string-append "gitrev = \"v" ,version "\"")))))
636 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
637 ;; This replacement does the same thing, except for using $PREFIX/bin
638 ;; instead.
639 (replace 'install
640 (lambda* (#:key outputs #:allow-other-keys)
641 (let* ((out (assoc-ref outputs "out"))
642 (bin (string-append out "/bin")))
643 (install-file "sparql-query" bin)
644 (system* "ln" "--symbolic"
645 (string-append bin "/sparql-query")
646 (string-append bin "/sparql-update")))))
647 (replace 'check
648 (lambda* (#:key make-flags #:allow-other-keys)
649 (and
650 (zero? (apply system* "make" `(,@make-flags "scan-test")))
651 (zero? (system "./scan-test"))))))))
652 (home-page "https://github.com/tialaramex/sparql-query/")
653 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
654 (description "Sparql-query is a command-line tool for accessing SPARQL
655endpoints over HTTP. It has been intentionally designed to 'feel' similar to
656tools for interrogating SQL databases. For example, you can enter a query over
657several lines, using a semi-colon at the end of a line to indicate the end of
658your query. It also supports readline so that you can more easily recall and
659edit previous queries, even across sessions. It can be used non-interactively,
660for example from a shell script.")
661 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
662 ;; others (like sparql-query.c) contain a GPLv2+ license header.
ba8b9f8d 663 (license (list license:gpl3+))))
b92d02d9 664
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665(define-public sqlite
666 (package
667 (name "sqlite")
a66a2a01 668 (version "3.14.1")
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669 (source (origin
670 (method url-fetch)
671 ;; TODO: Download from sqlite.org once this bug :
672 ;; http://lists.gnu.org/archive/html/bug-guile/2013-01/msg00027.html
673 ;; has been fixed.
674 (uri (let ((numeric-version
675 (match (string-split version #\.)
676 ((first-digit other-digits ...)
677 (string-append first-digit
678 (string-pad-right
679 (string-concatenate
680 (map (cut string-pad <> 2 #\0)
681 other-digits))
682 6 #\0))))))
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683 (list
684 (string-append
75710da6
LC
685 "https://fossies.org/linux/misc/sqlite-autoconf-"
686 numeric-version ".tar.gz")
42e66649 687 (string-append
75710da6
LC
688 "http://distfiles.gentoo.org/distfiles/"
689 "/sqlite-autoconf-" numeric-version ".tar.gz"))
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690
691 ;; XXX: As of 2015-09-08, SourceForge is squatting the URL
692 ;; below, returning 200 and showing an advertising page.
693 ;; (string-append
694 ;; "mirror://sourceforge/sqlite.mirror/SQLite%20" version
695 ;; "/sqlite-autoconf-" numeric-version ".tar.gz")
696 ))
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697 (sha256
698 (base32
a66a2a01 699 "19j73j44akqgc6m82wm98yvnmm3mfzmfqr8mp3n7n080d53q4wdw"))))
5f96f303 700 (build-system gnu-build-system)
8f1d22b7 701 (inputs `(("readline" ,readline)))
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702 (arguments
703 `(#:configure-flags
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704 ;; Add -DSQLITE_SECURE_DELETE, -DSQLITE_ENABLE_UNLOCK_NOTIFY and
705 ;; -DSQLITE_ENABLE_DBSTAT_VTAB to CFLAGS. GNU Icecat will refuse
706 ;; to use the system SQLite unless these options are enabled.
707 (list (string-append "CFLAGS=-O2 -DSQLITE_SECURE_DELETE "
708 "-DSQLITE_ENABLE_UNLOCK_NOTIFY "
709 "-DSQLITE_ENABLE_DBSTAT_VTAB"))))
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710 (home-page "http://www.sqlite.org/")
711 (synopsis "The SQLite database management system")
712 (description
713 "SQLite is a software library that implements a self-contained, serverless,
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714zero-configuration, transactional SQL database engine. SQLite is the most
715widely deployed SQL database engine in the world. The source code for SQLite
716is in the public domain.")
ba8b9f8d 717 (license license:public-domain)))
db60b1d9 718
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719(define-public sqlite-3.15.1
720 (package (inherit sqlite)
721 (version "3.15.1")
722 (source (origin
723 (method url-fetch)
724 (uri (let ((numeric-version
725 (match (string-split version #\.)
726 ((first-digit other-digits ...)
727 (string-append first-digit
728 (string-pad-right
729 (string-concatenate
730 (map (cut string-pad <> 2 #\0)
731 other-digits))
732 6 #\0))))))
733 (string-append "https://sqlite.org/2016/sqlite-autoconf-"
734 numeric-version ".tar.gz")))
735 (sha256
736 (base32
737 "1ig2d9jzzixiifmgqsl6kjcvy17jwxby3s24gfnc5qvyd6vqkyjx"))))))
738
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739(define-public tdb
740 (package
741 (name "tdb")
1abd0904 742 (version "1.3.11")
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743 (source (origin
744 (method url-fetch)
ca473fc2 745 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
db60b1d9
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746 version ".tar.gz"))
747 (sha256
748 (base32
1abd0904 749 "0i1l38h0vyck6zkcj4fn2l03spadlmyr1qa1xpdp9dy2ccbm3s1r"))))
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750 (build-system gnu-build-system)
751 (arguments
6ccb7814
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752 '(#:phases
753 (modify-phases %standard-phases
754 (replace 'configure
755 (lambda* (#:key outputs #:allow-other-keys)
756 (let ((out (assoc-ref outputs "out")))
757 ;; The 'configure' script is a wrapper for Waf and
758 ;; doesn't recognize things like '--enable-fast-install'.
759 (zero? (system* "./configure"
760 (string-append "--prefix=" out)))))))))
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761 (native-inputs
762 `(;; TODO: Build the documentation.
763 ;; ("docbook-xsl" ,docbook-xsl)
764 ;; ("libxml2" ,libxml2)
765 ;; ("libxslt" ,libxslt)
766 ("python" ,python-2))) ;for the Waf build system
1abd0904 767 (home-page "https://tdb.samba.org/")
35b9e423 768 (synopsis "Trivial database")
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769 (description
770 "TDB is a Trivial Database. In concept, it is very much like GDBM,
771and BSD's DB except that it allows multiple simultaneous writers and uses
772locking internally to keep writers from trampling on each other. TDB is also
773extremely small.")
ba8b9f8d 774 (license license:lgpl3+)))
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775
776(define-public perl-dbi
777 (package
778 (name "perl-dbi")
6138dede 779 (version "1.636")
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780 (source (origin
781 (method url-fetch)
782 (uri (string-append
783 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
784 version ".tar.gz"))
785 (sha256
786 (base32
6138dede 787 "0v37vnr5p0bx396cj0lb5kb69jbryq2mspp602hbgd04gklxqzcg"))))
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788 (build-system perl-build-system)
789 (synopsis "Database independent interface for Perl")
790 (description "This package provides an database interface for Perl.")
6138dede 791 (home-page "http://search.cpan.org/dist/DBI")
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792 (license (package-license perl))))
793
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794(define-public perl-dbix-class
795 (package
796 (name "perl-dbix-class")
5d78d746 797 (version "0.082840")
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798 (source
799 (origin
800 (method url-fetch)
801 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
802 "DBIx-Class-" version ".tar.gz"))
803 (sha256
804 (base32
5d78d746 805 "1vw1f756g8m5hq11nqf5dk2cw2y4mqq91ca5p75fn5g3fp8syja0"))))
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806 (build-system perl-build-system)
807 (native-inputs
808 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
809 ("perl-file-temp" ,perl-file-temp)
810 ("perl-package-stash" ,perl-package-stash)
811 ("perl-test-deep" ,perl-test-deep)
812 ("perl-test-exception" ,perl-test-exception)
813 ("perl-test-warn" ,perl-test-warn)))
814 (propagated-inputs
815 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
816 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
817 ("perl-class-inspector" ,perl-class-inspector)
818 ("perl-config-any" ,perl-config-any)
819 ("perl-context-preserve" ,perl-context-preserve)
820 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
821 ("perl-data-page" ,perl-data-page)
822 ("perl-dbi" ,perl-dbi)
823 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
824 ("perl-hash-merge" ,perl-hash-merge)
825 ("perl-module-find" ,perl-module-find)
826 ("perl-moo" ,perl-moo)
827 ("perl-mro-compat" ,perl-mro-compat)
828 ("perl-namespace-clean" ,perl-namespace-clean)
829 ("perl-path-class" ,perl-path-class)
830 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
831 ("perl-scope-guard" ,perl-scope-guard)
832 ("perl-sql-abstract" ,perl-sql-abstract)
833 ("perl-sub-name" ,perl-sub-name)
834 ("perl-text-balanced" ,perl-text-balanced)
835 ("perl-try-tiny" ,perl-try-tiny)))
836 (home-page "http://search.cpan.org/dist/DBIx-Class")
837 (synopsis "Extensible and flexible object <-> relational mapper")
838 (description "An SQL to OO mapper with an object API inspired by
839Class::DBI (with a compatibility layer as a springboard for porting) and a
840resultset API that allows abstract encapsulation of database operations. It
841aims to make representing queries in your code as perl-ish as possible while
842still providing access to as many of the capabilities of the database as
843possible, including retrieving related records from multiple tables in a
844single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
845\"ORDER BY\" and \"HAVING\" support.")
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846 (license (package-license perl))))
847
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848(define-public perl-dbix-class-cursor-cached
849 (package
850 (name "perl-dbix-class-cursor-cached")
180cb81b 851 (version "1.001004")
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852 (source
853 (origin
854 (method url-fetch)
855 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
856 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
857 (sha256
858 (base32
180cb81b 859 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
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860 (build-system perl-build-system)
861 (native-inputs
862 `(("perl-cache-cache" ,perl-cache-cache)
863 ("perl-dbd-sqlite" ,perl-dbd-sqlite)))
864 (propagated-inputs
865 `(("perl-carp-clan" ,perl-carp-clan)
866 ("perl-dbix-class" ,perl-dbix-class)))
867 (home-page "http://search.cpan.org/dist/DBIx-Class-Cursor-Cached")
868 (synopsis "Cursor with built-in caching support")
869 (description "DBIx::Class::Cursor::Cached provides a cursor class with
870built-in caching support.")
871 (license (package-license perl))))
872
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873(define-public perl-dbix-class-introspectablem2m
874 (package
875 (name "perl-dbix-class-introspectablem2m")
7a462b80 876 (version "0.001002")
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877 (source
878 (origin
879 (method url-fetch)
68a9d6df 880 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
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881 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
882 (sha256
883 (base32
7a462b80 884 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
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885 (build-system perl-build-system)
886 (propagated-inputs
887 `(("perl-dbix-class" ,perl-dbix-class)))
888 (home-page "http://search.cpan.org/dist/DBIx-Class-IntrospectableM2M")
889 (synopsis "Introspect many-to-many relationships")
890 (description "Because the many-to-many relationships are not real
891relationships, they can not be introspected with DBIx::Class. Many-to-many
892relationships are actually just a collection of convenience methods installed
893to bridge two relationships. This DBIx::Class component can be used to store
894all relevant information about these non-relationships so they can later be
895introspected and examined.")
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896 (license (package-license perl))))
897
898(define-public perl-dbix-class-schema-loader
899 (package
900 (name "perl-dbix-class-schema-loader")
ebd2dbbf 901 (version "0.07046")
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902 (source
903 (origin
904 (method url-fetch)
905 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
906 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
907 (sha256
908 (base32
ebd2dbbf 909 "08cgn0dx42y9xsxas9np7s55a7qmy4kf6sfmx0jmk4hryvbapml3"))))
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910 (build-system perl-build-system)
911 (native-inputs
912 `(("perl-config-any" ,perl-config-any)
913 ("perl-config-general" ,perl-config-general)
914 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
915 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
916 ("perl-moose" ,perl-moose)
917 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
918 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
919 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
920 ("perl-test-deep" ,perl-test-deep)
921 ("perl-test-differences" ,perl-test-differences)
922 ("perl-test-exception" ,perl-test-exception)
923 ("perl-test-pod" ,perl-test-pod)
924 ("perl-test-warn" ,perl-test-warn)))
925 (propagated-inputs
926 `(("perl-class-unload" ,perl-class-unload)
927 ("perl-class-inspector" ,perl-class-inspector)
928 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
929 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
930 ("perl-carp-clan" ,perl-carp-clan)
931 ("perl-data-dump" ,perl-data-dump)
932 ("perl-dbix-class" ,perl-dbix-class)
933 ("perl-hash-merge" ,perl-hash-merge)
934 ("perl-list-moreutils" ,perl-list-moreutils)
935 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
936 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
937 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
938 ("perl-namespace-clean" ,perl-namespace-clean)
939 ("perl-mro-compat" ,perl-mro-compat)
940 ("perl-scope-guard" ,perl-scope-guard)
941 ("perl-string-camelcase" ,perl-string-camelcase)
942 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
943 ("perl-sub-name" ,perl-sub-name)
944 ("perl-try-tiny" ,perl-try-tiny)))
945 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
946 (home-page "http://search.cpan.org/dist/DBIx-Class-Schema-Loader")
947 (synopsis "Create a DBIx::Class::Schema based on a database")
948 (description "DBIx::Class::Schema::Loader automates the definition of a
949DBIx::Class::Schema by scanning database table definitions and setting up the
950columns, primary keys, unique constraints and relationships.")
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951 (license (package-license perl))))
952
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953(define-public perl-dbd-pg
954 (package
955 (name "perl-dbd-pg")
956 (version "3.5.1")
957 (source
958 (origin
959 (method url-fetch)
960 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
961 "DBD-Pg-" version ".tar.gz"))
962 (sha256
963 (base32
964 "0z0kf1kjgbi5f6nr63i2fnrx7629d9lvxg1q8sficwb3zdf1ggzx"))))
965 (build-system perl-build-system)
966 (native-inputs
967 `(("perl-dbi" ,perl-dbi)))
968 (propagated-inputs
969 `(("perl-dbi" ,perl-dbi)
970 ("postgresql" ,postgresql)))
971 (home-page "http://search.cpan.org/dist/DBD-Pg")
972 (synopsis "DBI PostgreSQL interface")
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973 (description "This package provides a PostgreSQL driver for the Perl5
974@dfn{Database Interface} (DBI).")
186eb132
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975 (license (package-license perl))))
976
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977(define-public perl-dbd-mysql
978 (package
979 (name "perl-dbd-mysql")
7c635ed6 980 (version "4.041")
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981 (source
982 (origin
983 (method url-fetch)
7c635ed6 984 (uri (string-append "mirror://cpan/authors/id/M/MI/MICHIELB/"
4b7857a4
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985 "DBD-mysql-" version ".tar.gz"))
986 (sha256
987 (base32
7c635ed6 988 "0h4h6zwzj8fwh9ljb8svnsa0a3ch4p10hp59kpdibdb4qh8xwxs7"))))
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989 (build-system perl-build-system)
990 ;; Tests require running MySQL server
991 (arguments `(#:tests? #f))
992 (propagated-inputs
993 `(("perl-dbi" ,perl-dbi)
994 ("mysql" ,mysql)))
995 (home-page "http://search.cpan.org/dist/DBD-mysql")
996 (synopsis "DBI MySQL interface")
997 (description "This package provides a MySQL driver for the Perl5
998@dfn{Database Interface} (DBI).")
999 (license (package-license perl))))
1000
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1001(define-public perl-dbd-sqlite
1002 (package
1003 (name "perl-dbd-sqlite")
467d4c85 1004 (version "1.52")
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1005 (source (origin
1006 (method url-fetch)
1007 (uri (string-append
1008 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1009 version ".tar.gz"))
1010 (sha256
1011 (base32
467d4c85 1012 "0kimb2qr1rh07yylbbfybwcizpmy61ck667amypn4clmkfg0knm6"))))
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1013 (build-system perl-build-system)
1014 (inputs `(("sqlite" ,sqlite)))
1015 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1016 (synopsis "SQlite interface for Perl")
1017 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1018the entire thing in the distribution. So in order to get a fast transaction
1019capable RDBMS working for your Perl project you simply have to install this
1020module, and nothing else.")
1021 (license (package-license perl))
1022 (home-page "http://search.cpan.org/~ishigaki/DBD-SQLite/lib/DBD/SQLite.pm")))
14e84b2d 1023
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1024(define-public perl-sql-abstract
1025 (package
1026 (name "perl-sql-abstract")
1027 (version "1.81")
1028 (source
1029 (origin
1030 (method url-fetch)
1031 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1032 "SQL-Abstract-" version ".tar.gz"))
1033 (sha256
1034 (base32
1035 "17sgwq3mvqjhv3b77cnvrq60xgp8harjhlnvpwmxc914rqc5ckaz"))))
1036 (build-system perl-build-system)
1037 (native-inputs
1038 `(("perl-test-deep" ,perl-test-deep)
1039 ("perl-test-exception" ,perl-test-exception)
1040 ("perl-test-warn" ,perl-test-warn)))
1041 (propagated-inputs
1042 `(("perl-hash-merge" ,perl-hash-merge)
1043 ("perl-moo" ,perl-moo)
1044 ("perl-mro-compat" ,perl-mro-compat)
1045 ("perl-text-balanced" ,perl-text-balanced)))
1046 (home-page "http://search.cpan.org/dist/SQL-Abstract")
1047 (synopsis "Generate SQL from Perl data structures")
1048 (description "This module was inspired by the excellent DBIx::Abstract.
1049While based on the concepts used by DBIx::Abstract, the concepts used have
1050been modified to make the SQL easier to generate from Perl data structures.
1051The underlying idea is for this module to do what you mean, based on the data
1052structures you provide it, so that you don't have to modify your code every
e881752c 1053time your data changes.")
dd90952e 1054 (license (package-license perl))))
14e84b2d 1055
b4dcb026
EB
1056(define-public perl-sql-splitstatement
1057 (package
1058 (name "perl-sql-splitstatement")
1059 (version "1.00020")
1060 (source
1061 (origin
1062 (method url-fetch)
1063 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
1064 "SQL-SplitStatement-" version ".tar.gz"))
1065 (sha256
1066 (base32
1067 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
1068 (build-system perl-build-system)
1069 (native-inputs
1070 `(("perl-test-exception" ,perl-test-exception)))
1071 (propagated-inputs
1072 `(("perl-class-accessor" ,perl-class-accessor)
1073 ("perl-list-moreutils" ,perl-list-moreutils)
1074 ("perl-regexp-common" ,perl-regexp-common)
1075 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
1076 (home-page "http://search.cpan.org/dist/SQL-SplitStatement")
1077 (synopsis "Split SQL code into atomic statements")
1078 (description "This module tries to split any SQL code, even including
1079non-standard extensions, into the atomic statements it is composed of.")
1080 (license (package-license perl))))
1081
718c89c1
EB
1082(define-public perl-sql-tokenizer
1083 (package
1084 (name "perl-sql-tokenizer")
1085 (version "0.24")
1086 (source
1087 (origin
1088 (method url-fetch)
1089 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
1090 "SQL-Tokenizer-" version ".tar.gz"))
1091 (sha256
1092 (base32
1093 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
1094 (build-system perl-build-system)
1095 (home-page "http://search.cpan.org/dist/SQL-Tokenizer")
1096 (synopsis "SQL tokenizer")
1097 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
1098claim to be a parser or query verifier. It just creates sane tokens from a
1099valid SQL query.")
1100 (license (package-license perl))))
1101
14e84b2d
JD
1102(define-public unixodbc
1103 (package
1104 (name "unixodbc")
3fef0a2f 1105 (version "2.3.4")
14e84b2d
JD
1106 (source (origin
1107 (method url-fetch)
e881752c 1108 (uri
14e84b2d 1109 (string-append
3fef0a2f
EF
1110 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
1111 version ".tar.gz"))
14e84b2d 1112 (sha256
3fef0a2f 1113 (base32 "0f8y88rcc2akjvjv5y66yx7k0ms9h1s0vbcfy25j93didflhj59f"))))
14e84b2d
JD
1114 (build-system gnu-build-system)
1115 (synopsis "Data source abstraction library")
1116 (description "Unixodbc is a library providing an API with which to access
1117data sources. Data sources include SQL Servers and any software with an ODBC
1118Driver.")
ba8b9f8d 1119 (license license:lgpl2.1+)
14e84b2d
JD
1120 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
1121 (home-page "http://www.unixodbc.org")))
b4a9c924
EB
1122
1123(define-public unqlite
1124 (package
1125 (name "unqlite")
1126 (version "1.1.6")
1127 (source (origin
1128 (method url-fetch)
1129 ;; Contains bug fixes against the official release, and has an
1130 ;; autotooled build system.
1131 (uri (string-append "https://github.com/aidin36/tocc/releases/"
1132 "download/v1.0.0/"
1133 "unqlite-unofficial-" version ".tar.gz"))
1134 (sha256
1135 (base32
1136 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
1137 (build-system gnu-build-system)
1138 (arguments `(#:tests? #f)) ;No check target
1139 (home-page "http://www.unqlite.org")
1140 (synopsis "In-memory key/value and document store")
1141 (description
1142 "UnQLite is an in-process software library which implements a
1143self-contained, serverless, zero-configuration, transactional NoSQL
1144database engine. UnQLite is a document store database similar to
1145MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
69b4ffcf 1146similar to BerkeleyDB, LevelDB, etc.")
ba8b9f8d 1147 (license license:bsd-2)))
463f6766
DT
1148
1149(define-public redis
1150 (package
1151 (name "redis")
b25f060f 1152 (version "3.2.4")
463f6766
DT
1153 (source (origin
1154 (method url-fetch)
1155 (uri (string-append "http://download.redis.io/releases/redis-"
1156 version".tar.gz"))
1157 (sha256
1158 (base32
b25f060f 1159 "1wb9jd692a0y52bkkxr6815kk4g039mirjdrvqx24265lv2l5l1a"))))
463f6766
DT
1160 (build-system gnu-build-system)
1161 (arguments
1162 '(#:tests? #f ; tests related to master/slave and replication fail
1163 #:phases (modify-phases %standard-phases
1164 (delete 'configure))
1165 #:make-flags `("CC=gcc"
1166 "MALLOC=libc"
b25f060f 1167 "LDFLAGS=-ldl"
463f6766
DT
1168 ,(string-append "PREFIX="
1169 (assoc-ref %outputs "out")))))
1170 (synopsis "Key-value cache and store")
1171 (description "Redis is an advanced key-value cache and store. Redis
1172supports many data structures including strings, hashes, lists, sets, sorted
1173sets, bitmaps and hyperloglogs.")
1174 (home-page "http://redis.io/")
ba8b9f8d 1175 (license license:bsd-3)))
a65e2a02 1176
1177(define-public kyotocabinet
1178 (package
1179 (name "kyotocabinet")
1180 (version "1.2.76")
1181 (source (origin
1182 (method url-fetch)
1183 (uri (string-append "http://fallabs.com/kyotocabinet/pkg/"
1184 name "-" version ".tar.gz"))
1185 (sha256
1186 (base32
1187 "0g6js20x7vnpq4p8ghbw3mh9wpqksya9vwhzdx6dnlf354zjsal1"))))
1188 (build-system gnu-build-system)
1189 (arguments
1190 `(#:configure-flags
1191 (list
1192 (string-append "LDFLAGS=-Wl,-rpath="
1193 (assoc-ref %outputs "out") "/lib"))))
1194 (inputs `(("zlib" ,zlib)))
1195 (home-page "http://fallabs.com/kyotocabinet/")
1196 (synopsis
1197 "Kyoto Cabinet is a modern implementation of the DBM database")
1198 (description
1199 "Kyoto Cabinet is a standalone file-based database that supports Hash
1200and B+ Tree data storage models. It is a fast key-value lightweight
1201database and supports many programming languages. It is a NoSQL database.")
ba8b9f8d 1202 (license license:gpl3+)))
6242b314 1203
bdc11dc4 1204(define-public tokyocabinet
1205 (package
1206 (name "tokyocabinet")
1207 (version "1.4.48")
1208 (source
1209 (origin
1210 (method url-fetch)
1211 (uri (string-append "http://fallabs.com/tokyocabinet/"
1212 name "-" version ".tar.gz"))
1213 (sha256
1214 (base32
1215 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
1216 (build-system gnu-build-system)
1217 (arguments
1218 `(#:configure-flags
1219 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
1220 (string-append "LDFLAGS=-Wl,-rpath="
1221 (assoc-ref %outputs "out") "/lib"))))
1222 (inputs
1223 `(("zlib" ,zlib)))
1224 (home-page "http://fallabs.com/tokyocabinet/")
1225 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
1226 (description
1227 "Tokyo Cabinet is a library of routines for managing a database.
1228The database is a simple data file containing records, each is a pair of a
1229key and a value. Every key and value is serial bytes with variable length.
1230Both binary data and character string can be used as a key and a value.
1231There is neither concept of data tables nor data types. Records are
1232organized in hash table, B+ tree, or fixed-length array.")
1233 (license license:lgpl2.1+)))
1234
6242b314
SB
1235(define-public wiredtiger
1236 (package
1237 (name "wiredtiger")
81e95821 1238 (version "2.9.1")
6242b314
SB
1239 (source (origin
1240 (method url-fetch)
1241 (uri (string-append
1242 "http://source.wiredtiger.com/releases/wiredtiger-"
1243 version ".tar.bz2"))
1244 (sha256
1245 (base32
81e95821 1246 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
6242b314
SB
1247 (build-system gnu-build-system)
1248 (arguments
1249 '(#:configure-flags '("--enable-lz4" "--enable-zlib")
1250 #:phases
1251 (modify-phases %standard-phases
1252 (add-before 'check 'disable-test/fops
1253 (lambda _
1254 ;; XXX: timed out after 3600 seconds of silence
1255 (substitute* "Makefile"
1256 (("test/fops") ""))
1257 #t)))))
1258 (inputs
1259 `(("lz4" ,lz4)
1260 ("zlib" ,zlib)))
1261 (home-page "http://source.wiredtiger.com/")
1262 (synopsis "NoSQL data engine")
1263 (description
1264 "WiredTiger is an extensible platform for data management. It supports
1265row-oriented storage (where all columns of a row are stored together),
1266column-oriented storage (where columns are stored in groups, allowing for
1267more efficient access and storage of column subsets) and log-structured merge
1268trees (LSM), for sustained throughput under random insert workloads.")
ba8b9f8d 1269 (license license:gpl3) ; or GPL-2
6242b314
SB
1270 ;; configure.ac: WiredTiger requires a 64-bit build.
1271 (supported-systems '("x86_64-linux" "mips64el-linux"))))
90c2ee88
DM
1272
1273(define-public perl-db-file
1274 (package
1275 (name "perl-db-file")
1276 (version "1.838")
1277 (source
1278 (origin
1279 (method url-fetch)
1280 (uri (string-append
1281 "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
1282 version
1283 ".tar.gz"))
1284 (sha256
1285 (base32
1286 "0yp5d5zr8dk9g6xdh7ygi5bq63q7nxvhd58dk2i3ki4nb7yv2yh9"))))
1287 (build-system perl-build-system)
1288 (inputs `(("bdb" ,bdb)))
1289 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
1290 (arguments
1291 `(#:phases (modify-phases %standard-phases
1292 (add-before
1293 'configure 'modify-config.in
1294 (lambda* (#:key inputs #:allow-other-keys)
1295 (substitute* "config.in"
1296 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
1297 #t)))))
1298 (home-page "http://search.cpan.org/dist/DB_File")
1299 (synopsis
1300 "Perl5 access to Berkeley DB version 1.x")
1301 (description
1302 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
1303 (license (package-license perl))))
0e1b262e
DC
1304
1305(define-public lmdb
1306 (package
1307 (name "lmdb")
1308 (version "0.9.18")
1309 (source (origin
1310 (method url-fetch)
1311 (uri (string-append "https://github.com/LMDB/lmdb/archive/"
1312 "LMDB_" version ".tar.gz"))
1313 (sha256
1314 (base32
1315 "12crvzxky8in99ibh22k4ppmkgqs28yy3v7yy944za7fsrqv8dfx"))))
1316 (build-system gnu-build-system)
1317 (arguments
1318 `(#:test-target "test"
1319 #:phases
1320 (modify-phases %standard-phases
1321 (replace 'configure
1322 (lambda* (#:key outputs #:allow-other-keys)
1323 (chdir (string-append
1324 (getenv "PWD") "/lmdb-LMDB_" ,version "/libraries/liblmdb"))
1325 (substitute* "Makefile"
1326 (("/usr/local") (assoc-ref outputs "out")))
1327 #t)))))
1328 (home-page "https://symas.com/products/lightning-memory-mapped-database")
1329 (synopsis "Lightning memory-mapped database library")
1330 (description "Lightning memory-mapped database library.")
1331 (license license:openldap2.8)))
fe71eee0
JN
1332
1333(define-public libpqxx
1334 (package
1335 (name "libpqxx")
1336 (version "4.0.1")
1337 (source (origin
1338 (method url-fetch)
1339 (uri (string-append
1340 "http://pqxx.org/download/software/libpqxx/"
1341 name "-" version ".tar.gz"))
1342 (sha256
1343 (base32
1344 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
1345 (build-system gnu-build-system)
1346 (native-inputs
1347 `(("python" ,python-2)))
1348 (inputs `(("postgresql" ,postgresql)))
1349 (arguments
1350 `(#:tests? #f)) ; # FAIL: 1
1351 (synopsis "C++ connector for PostgreSQL")
1352 (description
1353 "Libpqxx is a C++ library to enable user programs to communicate with the
1354PostgreSQL database back-end. The database back-end can be local or it may be
1355on another machine, accessed via TCP/IP.")
1356 (home-page "http://pqxx.org/")
1357 (license license:bsd-3)))
4d98bfaf
EF
1358
1359(define-public python-peewee
1360 (package
1361 (name "python-peewee")
1362 (version "2.8.3")
1363 (source
1364 (origin
1365 (method url-fetch)
1366 (uri (pypi-uri "peewee" version))
1367 (sha256
1368 (base32
1369 "1605bk11s7aap2q4qyba93rx7yfh8b11kk0cqi08z8klx2iar8yd"))))
1370 (build-system python-build-system)
1371 (arguments
1372 `(#:tests? #f)) ; Fails to import test data
1373 (native-inputs
1374 `(("python-cython" ,python-cython)))
1375 (home-page "https://github.com/coleifer/peewee/")
1376 (synopsis "Small object-relational mapping utility")
1377 (description
1378 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
1379handles converting between pythonic values and those used by databases, so you
1380can use Python types in your code without having to worry. It has built-in
1381support for sqlite, mysql and postgresql. If you already have a database, you
1382can autogenerate peewee models using @code{pwiz}, a model generator.")
1383 (license license:expat)))
1384
1385(define-public python2-peewee
1386 (package-with-python2 python-peewee))
62ea44fc
AP
1387
1388(define-public sqlcipher
1389 (package
1390 (name "sqlcipher")
1391 (version "3.3.1")
1392 (source
1393 (origin
1394 (method url-fetch)
1395 (uri (string-append "https://github.com/sqlcipher/" name
1396 "/archive/v" version ".tar.gz"))
1397 (sha256
1398 (base32 "1gv58dlbpzrmznly52yqbxgvii0ib88zr3aszla1bsypwjr6flff"))
1399 (file-name (string-append name "-" version ".tar.gz"))))
1400 (build-system gnu-build-system)
1401 (inputs
1402 `(("libcrypto" ,openssl)
1403 ("libtcl8.6" ,tcl))) ; required for running the tests
1404 (native-inputs
1405 `(("tcl" ,tcl)))
1406 (arguments
1407 '(#:configure-flags
1408 '("--enable-tempstore=yes"
1409 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
1410 "LDFLAGS=-lcrypto -ltcl8.6"
1411 "--disable-tcl")
1412 ;; tests cannot be run from the Makefile
1413 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
1414 #:test-target "testfixture"
1415 #:phases
1416 (modify-phases %standard-phases
1417 (add-before 'check 'build-test-runner
1418 (assoc-ref %standard-phases 'check))
1419 (replace 'check
1420 (lambda _
1421 (zero?
1422 (system* "./testfixture" "test/crypto.test")))))))
1423 (home-page "https://www.zetetic.net/sqlcipher/")
1424 (synopsis
1425 "Library providing transparent encryption of SQLite database files")
1426 (description "SQLCipher is an implementation of SQLite, extended to
1427provide transparent 256-bit AES encryption of database files. Pages are
1428encrypted before being written to disk and are decrypted when read back. It’s
1429well suited for protecting embedded application databases and for mobile
1430development.")
1431 ;; The source files
1432 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
1433 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
1434 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
1435 ;; source files are in the public domain.
1436 (license (list license:public-domain license:bsd-3))))
98d403bb
DM
1437
1438(define-public python-pyodbc-c
1439 (package
1440 (name "python-pyodbc-c")
c6b6a74e 1441 (version "3.1.4")
98d403bb
DM
1442 (source
1443 (origin
1444 (method url-fetch)
1445 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
1446 "archive.tar.gz?ref=v" version))
1447 (sha256
1448 (base32
c6b6a74e 1449 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
98d403bb
DM
1450 (file-name (string-append name "-" version ".tar.gz"))))
1451 (build-system python-build-system)
1452 (inputs
1453 `(("unixodbc" ,unixodbc)))
1454 (arguments
1455 `(;; No unit tests exist.
1456 #:tests? #f))
1457 (home-page "https://github.com/mkleehammer/pyodbc")
1458 (synopsis "Python ODBC Library")
1459 (description "@code{python-pyodbc-c} provides a Python DB-API driver
1460for ODBC.")
1461 (license (license:x11-style "file://LICENSE.TXT"))))
1462
1463(define-public python2-pyodbc-c
1464 (package-with-python2 python-pyodbc-c))