jackhill/guix/guix.git
3 years agognu: libaom: Update to 3.1.0.
Leo Famulari [Thu, 20 May 2021 16:25:18 +0000 (12:25 -0400)]
gnu: libaom: Update to 3.1.0.

* gnu/packages/video.scm (libaom): Update to 3.1.0.

3 years agoguix: Build texlive-configuration only when texlive-base is present.
Ricardo Wurmus [Thu, 20 May 2021 14:26:46 +0000 (16:26 +0200)]
guix: Build texlive-configuration only when texlive-base is present.

Fixes <https://bugs.gnu.org/48519>.

* guix/profiles.scm (texlive-configuration): Build only if texlive-base is
present in the profile's manifest.

3 years agognu: emacs-ob-erlang: Update to 20210321.
Maxim Cournoyer [Thu, 20 May 2021 14:17:28 +0000 (10:17 -0400)]
gnu: emacs-ob-erlang: Update to 20210321.

* gnu/packages/emacs-xyz.scm (emacs-ob-erlang): Update to 20210321.

3 years agognu: Add julia-recipesbase.
Efraim Flashner [Thu, 20 May 2021 14:00:48 +0000 (17:00 +0300)]
gnu: Add julia-recipesbase.

* gnu/packages/julia-xyz.scm (julia-recipesbase): New variable.

3 years agognu: Add julia-static.
Efraim Flashner [Thu, 20 May 2021 14:00:48 +0000 (17:00 +0300)]
gnu: Add julia-static.

* gnu/packages/julia-xyz.scm (julia-static): New variable.

3 years agognu: Add julia-aqua.
Efraim Flashner [Thu, 20 May 2021 13:56:58 +0000 (16:56 +0300)]
gnu: Add julia-aqua.

* gnu/packages/julia-xyz.scm (julia-aqua): New variable.

3 years agognu: Add julia-pdmats.
Efraim Flashner [Thu, 20 May 2021 13:55:00 +0000 (16:55 +0300)]
gnu: Add julia-pdmats.

* gnu/packages/julia-xyz.scm (julia-pdmats): New variable.

3 years agognu: Add julia-stablerngs.
Efraim Flashner [Thu, 20 May 2021 13:52:08 +0000 (16:52 +0300)]
gnu: Add julia-stablerngs.

* gnu/packages/julia-xyz.scm (julia-stablerngs): New variable.

3 years agognu: Add julia-crayons.
Efraim Flashner [Thu, 20 May 2021 13:48:13 +0000 (16:48 +0300)]
gnu: Add julia-crayons.

* gnu/packages/julia-xyz.scm (julia-crayons): New variable.

3 years agognu: Add julia-parameters.
Efraim Flashner [Thu, 20 May 2021 13:44:59 +0000 (16:44 +0300)]
gnu: Add julia-parameters.

* gnu/packages/julia-xyz.scm (julia-parameters): New variable.

3 years agognu: Add julia-unpack.
Efraim Flashner [Thu, 20 May 2021 13:43:46 +0000 (16:43 +0300)]
gnu: Add julia-unpack.

* gnu/packages/julia-xyz.scm (julia-unpack): New variable.

3 years agognu: Add julia-safetestsets.
Efraim Flashner [Thu, 20 May 2021 13:38:41 +0000 (16:38 +0300)]
gnu: Add julia-safetestsets.

* gnu/packages/julia-xyz.scm (julia-safetestsets): New variable.

3 years agognu: Add julia-sortingalgorithms.
Efraim Flashner [Thu, 20 May 2021 13:34:16 +0000 (16:34 +0300)]
gnu: Add julia-sortingalgorithms.

* gnu/packages/julia-xyz.scm (julia-sortingalgorithms): New variable.

3 years agognu: Add julia-ifelse.
Efraim Flashner [Thu, 20 May 2021 13:28:45 +0000 (16:28 +0300)]
gnu: Add julia-ifelse.

* gnu/packages/julia-xyz.scm (julia-ifelse): New variable.

3 years agognu: Add julia-imagemagick-jll.
Efraim Flashner [Thu, 20 May 2021 13:26:28 +0000 (16:26 +0300)]
gnu: Add julia-imagemagick-jll.

* gnu/packages/julia-xyz.scm (julia-imagemagick-jll): New variable.

3 years agognu: Add julia-libtiff-jll.
Efraim Flashner [Thu, 20 May 2021 13:23:34 +0000 (16:23 +0300)]
gnu: Add julia-libtiff-jll.

* gnu/packages/julia-xyz.scm (julia-libtiff-jll): New variable.

3 years agognu: Add julia-libpng-jll.
Efraim Flashner [Thu, 20 May 2021 13:21:48 +0000 (16:21 +0300)]
gnu: Add julia-libpng-jll.

* gnu/packages/julia-xyz.scm (julia-libpng-jll): New variable.

3 years agognu: Add julia-zstd-jll.
Efraim Flashner [Thu, 20 May 2021 13:19:54 +0000 (16:19 +0300)]
gnu: Add julia-zstd-jll.

* gnu/packages/julia-xyz.scm (julia-zstd-jll): New variable.

3 years agognu: Add julia-jpegturbo-jll.
Efraim Flashner [Thu, 20 May 2021 13:15:37 +0000 (16:15 +0300)]
gnu: Add julia-jpegturbo-jll.

* gnu/packages/julia-xyz.scm (julia-jpegturbo-jll): New variable.

3 years agognu: emacs-picpocket: Update to version 41.
Maxim Cournoyer [Thu, 20 May 2021 13:59:18 +0000 (09:59 -0400)]
gnu: emacs-picpocket: Update to version 41.

Partially resolves <https://issues.guix.gnu.org/47592>.

* gnu/packages/emacs-xyz.scm (emacs-picpocket): Update to version 41.

3 years agognu: r-rhdf5filters: Update to 1.2.1.
Ricardo Wurmus [Thu, 20 May 2021 12:42:55 +0000 (14:42 +0200)]
gnu: r-rhdf5filters: Update to 1.2.1.

* gnu/packages/bioinformatics.scm (r-rhdf5filters): Update to 1.2.1.

3 years agognu: r-multidataset: Update to 1.18.2.
Ricardo Wurmus [Thu, 20 May 2021 12:42:52 +0000 (14:42 +0200)]
gnu: r-multidataset: Update to 1.18.2.

* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.2.

3 years agognu: txr: Update to 259.
Guillaume Le Vaillant [Thu, 20 May 2021 12:08:32 +0000 (14:08 +0200)]
gnu: txr: Update to 259.

* gnu/packages/lisp.scm (txr): Update to 259.

3 years agognu: sbcl-flexi-streams: Update to 1.0.19.
Sharlatan Hellseher [Wed, 19 May 2021 22:14:04 +0000 (23:14 +0100)]
gnu: sbcl-flexi-streams: Update to 1.0.19.

* gnu/packages/lisp-xyz.scm (sbcl-flexi-streams): Update to 1.0.19.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
3 years agognu: sbcl-fiveam: Update to 1.4.2.
Sharlatan Hellseher [Wed, 19 May 2021 22:09:44 +0000 (23:09 +0100)]
gnu: sbcl-fiveam: Update to 1.4.2.

* gnu/packages/lisp-xyz.scm (sbcl-fiveam): Update to 1.4.2.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
3 years agognu: sbcl-golden-utils: Update to 0.0.0-3.fe1898f.
Sharlatan Hellseher [Wed, 19 May 2021 22:06:47 +0000 (23:06 +0100)]
gnu: sbcl-golden-utils: Update to 0.0.0-3.fe1898f.

* gnu/packages/lisp-xyz.scp (sbcl-golden-utils): Update to 0.0.0-3.fe1898f.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
3 years agognu: sbcl-numcl: Update to 0.2.0-2.3dcdb0e.
Sharlatan Hellseher [Wed, 19 May 2021 21:56:11 +0000 (22:56 +0100)]
gnu: sbcl-numcl: Update to 0.2.0-2.3dcdb0e.

* gnu/packages/lisp-xyz.scm (sbcl-numcl): Update to 0.2.0-2.3dcdb0e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
3 years agognu: sbcl-pzmq: Update to 0.0.0-2.6f7b2ca.
Sharlatan Hellseher [Wed, 19 May 2021 21:46:03 +0000 (22:46 +0100)]
gnu: sbcl-pzmq: Update to 0.0.0-2.6f7b2ca.

* gnu/packages/lisp-xyz.scm (sbcl-pzmq): Update to 0.0.0-2.6f7b2ca.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
3 years agognu: emacs-org: Update to 9.4.6.
Nicolas Goaziou [Thu, 20 May 2021 11:58:29 +0000 (13:58 +0200)]
gnu: emacs-org: Update to 9.4.6.

* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.4.6.
[arguments]<phases>: Remove unnecessary phase.
(emacs-org-contrib): Update to 20210519.

3 years agognu: nyxt: Update to 2.0.0.
Pierre Neidhardt [Thu, 20 May 2021 10:30:48 +0000 (12:30 +0200)]
gnu: nyxt: Update to 2.0.0.

* gnu/packages/web-browsers.scm (nyxt): Update to 2.0.0.
[arguments]: Remove useless set-version phase.
[inputs]: Remove unused file-attributes.
[description]: Follow upstream updates.

3 years agognu: sbcl-iolib: Also build iolib/os.
Pierre Neidhardt [Thu, 20 May 2021 10:30:07 +0000 (12:30 +0200)]
gnu: sbcl-iolib: Also build iolib/os.

* gnu/packages/lisp-xyz.scm (sbcl-iolib)[arguments]: Add iolib/os to
asd-systems.

3 years agoscripts: challenge: Fix regression.
Mathieu Othacehe [Thu, 20 May 2021 09:44:35 +0000 (11:44 +0200)]
scripts: challenge: Fix regression.

This is a follow-up of 3cde5231aa78aa5e31b27888cd78ee0b250a7a1c that fixes the
challenge test.

When dealing with uncompressed NAR, the file size is false. Propagate it to
progress-reporter/file as it used to be the case.

* guix/scripts/challenge.scm (call-with-nar): Accept false size.

3 years agognu: r-lme4: Update to 1.1-27.
Ricardo Wurmus [Thu, 20 May 2021 08:54:48 +0000 (10:54 +0200)]
gnu: r-lme4: Update to 1.1-27.

* gnu/packages/statistics.scm (r-lme4): Update to 1.1-27.
[propagated-inputs]: Remove r-statmod.

3 years agognu: r-diptest: Update to 0.76-0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:48 +0000 (10:54 +0200)]
gnu: r-diptest: Update to 0.76-0.

* gnu/packages/statistics.scm (r-diptest): Update to 0.76-0.

3 years agognu: r-statmod: Update to 1.4.36.
Ricardo Wurmus [Thu, 20 May 2021 08:54:48 +0000 (10:54 +0200)]
gnu: r-statmod: Update to 1.4.36.

* gnu/packages/statistics.scm (r-statmod): Update to 1.4.36.

3 years agognu: r-viridis: Update to 0.6.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:48 +0000 (10:54 +0200)]
gnu: r-viridis: Update to 0.6.1.

* gnu/packages/statistics.scm (r-viridis): Update to 0.6.1.

3 years agognu: r-rmarkdown: Update to 2.8.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-rmarkdown: Update to 2.8.

* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.8.

3 years agognu: r-hms: Update to 1.1.0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-hms: Update to 1.1.0.

* gnu/packages/statistics.scm (r-hms): Update to 1.1.0.

3 years agognu: r-devtools: Update to 2.4.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-devtools: Update to 2.4.1.

* gnu/packages/statistics.scm (r-devtools): Update to 2.4.1.
[propagated-inputs]: Remove r-jsonlite.

3 years agognu: r-dplyr: Update to 1.0.6.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-dplyr: Update to 1.0.6.

* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.6.
[propagated-inputs]: Add r-pillar.

3 years agognu: r-tibble: Update to 3.1.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-tibble: Update to 3.1.2.

* gnu/packages/statistics.scm (r-tibble): Update to 3.1.2.

3 years agognu: r-stringi: Update to 1.6.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-stringi: Update to 1.6.2.

* gnu/packages/statistics.scm (r-stringi): Update to 1.6.2.

3 years agognu: r-matrix: Update to 1.3-3.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-matrix: Update to 1.3-3.

* gnu/packages/statistics.scm (r-matrix): Update to 1.3-3.

3 years agognu: r-pdftools: Update to 3.0.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:47 +0000 (10:54 +0200)]
gnu: r-pdftools: Update to 3.0.1.

* gnu/packages/cran.scm (r-pdftools): Update to 3.0.1.

3 years agognu: r-textshaping: Update to 0.3.4.
Ricardo Wurmus [Thu, 20 May 2021 08:54:46 +0000 (10:54 +0200)]
gnu: r-textshaping: Update to 0.3.4.

* gnu/packages/cran.scm (r-textshaping): Update to 0.3.4.

3 years agognu: r-seuratobject: Update to 4.0.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:46 +0000 (10:54 +0200)]
gnu: r-seuratobject: Update to 4.0.1.

* gnu/packages/cran.scm (r-seuratobject): Update to 4.0.1.
[propagated-inputs]: Remove r-sctransform.

3 years agognu: r-rsample: Update to 0.1.0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:46 +0000 (10:54 +0200)]
gnu: r-rsample: Update to 0.1.0.

* gnu/packages/cran.scm (r-rsample): Update to 0.1.0.
[propagated-inputs]: Add r-lifecycle.

3 years agognu: r-clusterr: Update to 1.2.4.
Ricardo Wurmus [Thu, 20 May 2021 08:54:46 +0000 (10:54 +0200)]
gnu: r-clusterr: Update to 1.2.4.

* gnu/packages/cran.scm (r-clusterr): Update to 1.2.4.

3 years agognu: r-rfast: Update to 2.0.3.
Ricardo Wurmus [Thu, 20 May 2021 08:54:46 +0000 (10:54 +0200)]
gnu: r-rfast: Update to 2.0.3.

* gnu/packages/cran.scm (r-rfast): Update to 2.0.3.

3 years agognu: r-oai: Update to 0.3.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:45 +0000 (10:54 +0200)]
gnu: r-oai: Update to 0.3.2.

* gnu/packages/cran.scm (r-oai): Update to 0.3.2.
[native-inputs]: Add r-knitr.

3 years agognu: r-proxyc: Update to 0.2.0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:45 +0000 (10:54 +0200)]
gnu: r-proxyc: Update to 0.2.0.

* gnu/packages/cran.scm (r-proxyc): Update to 0.2.0.

3 years agognu: r-caret: Update to 6.0-88.
Ricardo Wurmus [Thu, 20 May 2021 08:54:45 +0000 (10:54 +0200)]
gnu: r-caret: Update to 6.0-88.

* gnu/packages/cran.scm (r-caret): Update to 6.0-88.

3 years agognu: r-bio3d: Update to 2.4-2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:45 +0000 (10:54 +0200)]
gnu: r-bio3d: Update to 2.4-2.

* gnu/packages/cran.scm (r-bio3d): Update to 2.4-2.
[native-inputs]: Add r-knitr.

3 years agognu: r-terra: Update to 1.2-10.
Ricardo Wurmus [Thu, 20 May 2021 08:54:45 +0000 (10:54 +0200)]
gnu: r-terra: Update to 1.2-10.

* gnu/packages/cran.scm (r-terra): Update to 1.2-10.

3 years agognu: r-systemfonts: Update to 1.0.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:44 +0000 (10:54 +0200)]
gnu: r-systemfonts: Update to 1.0.2.

* gnu/packages/cran.scm (r-systemfonts): Update to 1.0.2.

3 years agognu: r-ibreakdown: Update to 2.0.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:44 +0000 (10:54 +0200)]
gnu: r-ibreakdown: Update to 2.0.1.

* gnu/packages/cran.scm (r-ibreakdown): Update to 2.0.1.

3 years agognu: r-ggplotify: Update to 0.0.7.
Ricardo Wurmus [Thu, 20 May 2021 08:54:44 +0000 (10:54 +0200)]
gnu: r-ggplotify: Update to 0.0.7.

* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.7.

3 years agognu: r-msigdbr: Update to 7.4.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:44 +0000 (10:54 +0200)]
gnu: r-msigdbr: Update to 7.4.1.

* gnu/packages/cran.scm (r-msigdbr): Update to 7.4.1.
[propagated-inputs]: Add r-babelgene.

3 years agognu: r-pegas: Update to 1.0-1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:44 +0000 (10:54 +0200)]
gnu: r-pegas: Update to 1.0-1.

* gnu/packages/cran.scm (r-pegas): Update to 1.0-1.

3 years agognu: r-valr: Update to 0.6.3.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-valr: Update to 0.6.3.

* gnu/packages/cran.scm (r-valr): Update to 0.6.3.

3 years agognu: r-irkernel: Update to 1.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-irkernel: Update to 1.2.

* gnu/packages/cran.scm (r-irkernel): Update to 1.2.

3 years agognu: r-fields: Update to 12.3.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-fields: Update to 12.3.

* gnu/packages/cran.scm (r-fields): Update to 12.3.
[propagated-inputs]: Add r-viridis.

3 years agognu: r-rnifti: Update to 1.3.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-rnifti: Update to 1.3.1.

* gnu/packages/cran.scm (r-rnifti): Update to 1.3.1.

3 years agognu: r-softimpute: Update to 1.4-1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-softimpute: Update to 1.4-1.

* gnu/packages/cran.scm (r-softimpute): Update to 1.4-1.
[native-inputs]: Add r-knitr.

3 years agognu: r-fmsb: Update to 0.7.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:43 +0000 (10:54 +0200)]
gnu: r-fmsb: Update to 0.7.1.

* gnu/packages/cran.scm (r-fmsb): Update to 0.7.1.

3 years agognu: r-ouch: Update to 2.17.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-ouch: Update to 2.17.

* gnu/packages/cran.scm (r-ouch): Update to 2.17.

3 years agognu: r-biocmanager: Update to 1.30.15.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-biocmanager: Update to 1.30.15.

* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.15.

3 years agognu: r-rcppparallel: Update to 5.1.4.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-rcppparallel: Update to 5.1.4.

* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.4.

3 years agognu: r-performance: Update to 0.7.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-performance: Update to 0.7.2.

* gnu/packages/cran.scm (r-performance): Update to 0.7.2.

3 years agognu: r-sandwich: Update to 3.0-1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-sandwich: Update to 3.0-1.

* gnu/packages/cran.scm (r-sandwich): Update to 3.0-1.

3 years agognu: r-flextable: Update to 0.6.6.
Ricardo Wurmus [Thu, 20 May 2021 08:54:42 +0000 (10:54 +0200)]
gnu: r-flextable: Update to 0.6.6.

* gnu/packages/cran.scm (r-flextable): Update to 0.6.6.

3 years agognu: r-sjmisc: Update to 2.8.7.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-sjmisc: Update to 2.8.7.

* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.7.

3 years agognu: r-sjlabelled: Update to 1.1.8.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-sjlabelled: Update to 1.1.8.

* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.8.

3 years agognu: r-insight: Update to 0.14.0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-insight: Update to 0.14.0.

* gnu/packages/cran.scm (r-insight): Update to 0.14.0.

3 years agognu: r-overlap: Update to 0.3.4.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-overlap: Update to 0.3.4.

* gnu/packages/cran.scm (r-overlap): Update to 0.3.4.

3 years agognu: r-arules: Update to 1.6-8.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-arules: Update to 1.6-8.

* gnu/packages/cran.scm (r-arules): Update to 1.6-8.

3 years agognu: r-cubature: Update to 2.0.4.2.
Ricardo Wurmus [Thu, 20 May 2021 08:54:41 +0000 (10:54 +0200)]
gnu: r-cubature: Update to 2.0.4.2.

* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.2.

3 years agognu: r-pillar: Update to 1.6.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:40 +0000 (10:54 +0200)]
gnu: r-pillar: Update to 1.6.1.

* gnu/packages/cran.scm (r-pillar): Update to 1.6.1.

3 years agognu: r-xfun: Update to 0.23.
Ricardo Wurmus [Thu, 20 May 2021 08:54:40 +0000 (10:54 +0200)]
gnu: r-xfun: Update to 0.23.

* gnu/packages/cran.scm (r-xfun): Update to 0.23.

3 years agognu: r-corrplot: Update to 0.88.
Ricardo Wurmus [Thu, 20 May 2021 08:54:40 +0000 (10:54 +0200)]
gnu: r-corrplot: Update to 0.88.

* gnu/packages/cran.scm (r-corrplot): Update to 0.88.
[native-inputs]: Add r-knitr.

3 years agognu: r-inline: Update to 0.3.18.
Ricardo Wurmus [Thu, 20 May 2021 08:54:40 +0000 (10:54 +0200)]
gnu: r-inline: Update to 0.3.18.

* gnu/packages/cran.scm (r-inline): Update to 0.3.18.

3 years agognu: r-distillery: Update to 1.2-1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:40 +0000 (10:54 +0200)]
gnu: r-distillery: Update to 1.2-1.

* gnu/packages/cran.scm (r-distillery): Update to 1.2-1.

3 years agognu: r-dendextend: Update to 1.15.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-dendextend: Update to 1.15.1.

* gnu/packages/cran.scm (r-dendextend): Update to 1.15.1.

3 years agognu: r-shape: Update to 1.4.6.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-shape: Update to 1.4.6.

* gnu/packages/cran.scm (r-shape): Update to 1.4.6.

3 years agognu: r-colorspace: Update to 2.0-1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-colorspace: Update to 2.0-1.

* gnu/packages/cran.scm (r-colorspace): Update to 2.0-1.

3 years agognu: r-bslib: Update to 0.2.5.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-bslib: Update to 0.2.5.1.

* gnu/packages/cran.scm (r-bslib): Update to 0.2.5.1.
[propagated-inputs]: Remove r-digest.

3 years agognu: r-sass: Update to 0.4.0.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-sass: Update to 0.4.0.

* gnu/packages/cran.scm (r-sass): Update to 0.4.0.
[propagated-inputs]: Remove r-digest.

3 years agognu: r-htmltable: Update to 2.2.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:39 +0000 (10:54 +0200)]
gnu: r-htmltable: Update to 2.2.1.

* gnu/packages/cran.scm (r-htmltable): Update to 2.2.1.

3 years agognu: r-httpuv: Update to 1.6.1.
Ricardo Wurmus [Thu, 20 May 2021 08:54:38 +0000 (10:54 +0200)]
gnu: r-httpuv: Update to 1.6.1.

* gnu/packages/cran.scm (r-httpuv): Update to 1.6.1.

3 years agognu: r-cachem: Update to 1.0.5.
Ricardo Wurmus [Thu, 20 May 2021 08:54:38 +0000 (10:54 +0200)]
gnu: r-cachem: Update to 1.0.5.

* gnu/packages/cran.scm (r-cachem): Update to 1.0.5.

3 years agognu: Add r-babelgene.
Ricardo Wurmus [Thu, 20 May 2021 08:53:21 +0000 (10:53 +0200)]
gnu: Add r-babelgene.

* gnu/packages/cran.scm (r-babelgene): New variable.

3 years agognu: isc-dhcp: Update bundled BIND to 9.11.32.
Tobias Geerinckx-Rice [Thu, 20 May 2021 08:50:17 +0000 (10:50 +0200)]
gnu: isc-dhcp: Update bundled BIND to 9.11.32.

* gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled BIND to 9.11.32.

3 years agognu: bind: Update to 9.16.16.
Tobias Geerinckx-Rice [Thu, 20 May 2021 08:49:24 +0000 (10:49 +0200)]
gnu: bind: Update to 9.16.16.

* gnu/packages/dns.scm (isc-bind): Update to 9.16.16.

3 years agognu: linux-libre 5.4: Update to 5.4.120.
Leo Famulari [Wed, 19 May 2021 23:38:20 +0000 (19:38 -0400)]
gnu: linux-libre 5.4: Update to 5.4.120.

* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.120.
(linux-libre-5.4-pristine-source): Update hash.

3 years agognu: linux-libre 5.10: Update to 5.10.38.
Leo Famulari [Wed, 19 May 2021 23:37:52 +0000 (19:37 -0400)]
gnu: linux-libre 5.10: Update to 5.10.38.

* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.38.
(linux-libre-5.10-pristine-source): Update hash.

3 years agognu: linux-libre: Update to 5.11.22.
Leo Famulari [Wed, 19 May 2021 23:37:25 +0000 (19:37 -0400)]
gnu: linux-libre: Update to 5.11.22.

* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.22.
(linux-libre-5.11-pristine-source): Update hash.

3 years agognu: linux-libre 5.12: Update to 5.12.5.
Leo Famulari [Wed, 19 May 2021 23:36:40 +0000 (19:36 -0400)]
gnu: linux-libre 5.12: Update to 5.12.5.

* gnu/packages/linux.scm (linux-libre-5.12-version): Update to 5.12.5.
(linux-libre-5.12-pristine-source): Update hash.

3 years agoservices: opendht: Fix hang at boot.
Maxim Cournoyer [Thu, 20 May 2021 02:27:25 +0000 (22:27 -0400)]
services: opendht: Fix hang at boot.

Fixes <https://issues.guix.gnu.org/48521>.

The problem was caused by the 'file-system-mapping' record not being in scope.

* gnu/services/networking.scm (opendht-shepherd-service): Import the (gnu
system file-systems) module.
[requirement]: Depend on networking, to avoid spurious output.
[modules]: New field.
[start] <group>: New argument.

3 years agoRevert "gnu: rxvt-unicode: Remove extraneous input."
Leo Famulari [Wed, 19 May 2021 23:34:49 +0000 (19:34 -0400)]
Revert "gnu: rxvt-unicode: Remove extraneous input."

This reverts commit c05b070cff0e5889877dc8d12d3a6bc2c15f1afe.

This commit was not quite correct, since rxvt-unicode still depends on
libX11 directly.

* gnu/packages/xdisorg.scm (rxvt-unicode)[inputs]: Add libx11.

3 years agoThe #guix channel is hosted by Libera Chat.
Tobias Geerinckx-Rice [Wed, 19 May 2021 23:56:14 +0000 (01:56 +0200)]
The #guix channel is hosted by Libera Chat.

* README (Contact): Update network name.
* ROADMAP: Likewise.
* doc/contributing.texi (Contributing): Likewise.
* doc/guix.texi (After System Installation): Likewise.