jackhill/guix/guix.git
8 years agoMerge branch 'master' into core-updates
Ludovic Courtès [Wed, 6 Apr 2016 10:00:29 +0000 (12:00 +0200)]
Merge branch 'master' into core-updates

8 years agognu: Add iodine.
Tobias Geerinckx-Rice [Mon, 4 Apr 2016 03:20:38 +0000 (05:20 +0200)]
gnu: Add iodine.

* gnu/packages/networking.scm (iodine): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: Add cddlib.
Andreas Enge [Tue, 5 Apr 2016 17:22:36 +0000 (19:22 +0200)]
gnu: Add cddlib.

* gnu/packages/maths.scm (cddlib): New variable.

8 years agognu: Add 4ti2.
Andreas Enge [Tue, 5 Apr 2016 16:48:02 +0000 (18:48 +0200)]
gnu: Add 4ti2.

* gnu/packages/maths.scm (4ti2): New variable.

8 years agognu: Add NTL.
Andreas Enge [Tue, 5 Apr 2016 15:40:35 +0000 (17:40 +0200)]
gnu: Add NTL.

* gnu/packages/algebra.scm (ntl): New variable.

8 years agognu: mercurial: Update to 3.7.3 [fixes CVE-2016-{3068,3069,3630}].
Efraim Flashner [Tue, 5 Apr 2016 14:31:34 +0000 (17:31 +0300)]
gnu: mercurial: Update to 3.7.3 [fixes CVE-2016-{3068,3069,3630}].

* gnu/packages/version-control.scm (mercurial): Update to 3.7.3.

8 years agognu: python-futures: Remove variable.
Efraim Flashner [Tue, 16 Feb 2016 16:38:27 +0000 (18:38 +0200)]
gnu: python-futures: Remove variable.

* gnu/packages/python.scm (python-futures): Remove it.

8 years agognu: git-annex-remote-hubic: Change to python2.
Efraim Flashner [Sat, 6 Feb 2016 21:12:37 +0000 (23:12 +0200)]
gnu: git-annex-remote-hubic: Change to python2.

* gnu/packages/version-control.scm (git-annex-remote-hubic)
[arguments]: Build with python2.

8 years agognu: Add wmbattery.
Kei Yamashita [Mon, 4 Apr 2016 20:59:02 +0000 (16:59 -0400)]
gnu: Add wmbattery.

* gnu/packages/gnustep.scm (wmbattery): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: vcftools: Update to 0.1.14.
Roel Janssen [Mon, 4 Apr 2016 18:04:48 +0000 (20:04 +0200)]
gnu: vcftools: Update to 0.1.14.

* gnu/packages/bioinformatics.scm (vcftools): Update to 0.1.14.
[arguments]: Do not modify phases as it is not needed anymore.
[native-inputs]: Add 'pkg-config'.
[home-page]: Update to new location.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: mutt: Update to 1.6.0.
Efraim Flashner [Tue, 5 Apr 2016 08:28:39 +0000 (11:28 +0300)]
gnu: mutt: Update to 1.6.0.

* gnu/packages/mail.scm (mutt): Update to 1.6.0.

8 years agognu: vim: Use 'modify-phases'.
Efraim Flashner [Wed, 9 Mar 2016 09:09:06 +0000 (11:09 +0200)]
gnu: vim: Use 'modify-phases'.

* gnu/packages/vim.scm (vim)[arguments]: Use 'modify-phases' syntax.

8 years agognu: mpd: Update to 0.19.14.
Leo Famulari [Tue, 5 Apr 2016 04:34:52 +0000 (00:34 -0400)]
gnu: mpd: Update to 0.19.14.

* gnu/packages/mpd.scm (mpd): Update to 0.19.14.

8 years agognu: libextractor: Improve ffmpeg-3 patch.
Mark H Weaver [Tue, 5 Apr 2016 03:48:34 +0000 (23:48 -0400)]
gnu: libextractor: Improve ffmpeg-3 patch.

* gnu/packages/patches/libextractor-ffmpeg-3.patch: Add additional
fixes and harmonize with patches in upstream repository.

8 years agognu: libextractor: Add patch to fix build with ffmpeg-3.
Mark H Weaver [Tue, 5 Apr 2016 02:52:51 +0000 (22:52 -0400)]
gnu: libextractor: Add patch to fix build with ffmpeg-3.

* gnu/packages/patches/libextractor-ffmpeg-3.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnunet.scm (libextractor)[source]: Add patch.

8 years agosystem: Define 'GTK_DATA_PREFIX' globally.
Ludovic Courtès [Mon, 4 Apr 2016 20:27:15 +0000 (22:27 +0200)]
system: Define 'GTK_DATA_PREFIX' globally.

Fixes <http://bugs.gnu.org/23200>.
Reported by Chris Marusich <cmmarusich@gmail.com>.

* gnu/system.scm (operating-system-environment-variables): Add
'GTK_DATA_PREFIX'.

8 years agoCoC: Clarify which project we're talking about.
Ludovic Courtès [Mon, 4 Apr 2016 15:28:10 +0000 (17:28 +0200)]
CoC: Clarify which project we're talking about.

* CODE-OF-CONDUCT: Define "project" and "project maintainer" as
suggested by rms.

8 years agognu: mplayer: Update to 1.3.0.
Raymond Nicholson [Mon, 4 Apr 2016 20:20:11 +0000 (21:20 +0100)]
gnu: mplayer: Update to 1.3.0.

* gnu/packages/video.scm (mplayer): Update to 1.3.0.

8 years agognu: gst-libav: Update to 1.8.0.
Raymond Nicholson [Mon, 4 Apr 2016 20:01:12 +0000 (21:01 +0100)]
gnu: gst-libav: Update to 1.8.0.

* gnu/packages/ffmpeg.scm (gst-libav): Update to 1.8.0.

8 years agognu: global: Update to 6.5.4.
Efraim Flashner [Mon, 4 Apr 2016 20:05:30 +0000 (23:05 +0300)]
gnu: global: Update to 6.5.4.

* gnu/packages/code.scm (global): Update to 6.5.4.

8 years agognu: network-manager: Update to 1.0.12.
Mark H Weaver [Mon, 4 Apr 2016 19:13:44 +0000 (15:13 -0400)]
gnu: network-manager: Update to 1.0.12.

* gnu/packages/gnome.scm (network-manager): Update to 1.0.12.

8 years agognu: scheme48: Update to 1.9.2.
Efraim Flashner [Mon, 4 Apr 2016 19:01:40 +0000 (22:01 +0300)]
gnu: scheme48: Update to 1.9.2.

* gnu/packages/scheme.scm (scheme48): Update to 1.9.2.

8 years agoemacs: Speed up starting the REPL.
Alex Kost [Thu, 31 Mar 2016 19:13:23 +0000 (22:13 +0300)]
emacs: Speed up starting the REPL.

Delay initializing variables.

* emacs/guix-main.scm: (%packages): Rename to...
(%package-vhash): ... this.  Delay setting the value.
(package-vhash): New procedure (wrapper for '%package-vhash').
(%package-table): Delay setting the value.
(package-table): New procedure (wrapper for '%package-table').
(package-by-address, packages-by-name+version): Use wrappers.

8 years agoemacs: Use (guix scripts lint) only when needed.
Alex Kost [Thu, 31 Mar 2016 18:36:18 +0000 (21:36 +0300)]
emacs: Use (guix scripts lint) only when needed.

* emacs/guix-main.scm: Do not use (guix scripts pull) module.
(lint-checker-names): Adjust to use it.

8 years agoemacs: Remove unused module.
Alex Kost [Thu, 31 Mar 2016 18:34:06 +0000 (21:34 +0300)]
emacs: Remove unused module.

This is a followup to commit c67e344f21fda2bf5a2a377a34d4749a1c7e7c9c.

* emacs/guix-main.scm: Do not use (guix scripts pull).

8 years agoemacs: Stylistic improvements in guile code.
Alex Kost [Thu, 31 Mar 2016 18:29:27 +0000 (21:29 +0300)]
emacs: Stylistic improvements in guile code.

* emacs/guix-main.scm (package-unique?): Use 'match' instead of 'cdr'.
(package-by-address): Likewise.

8 years agoemacs: Use 'build-and-use-profile' from (guix scripts package).
Alex Kost [Fri, 25 Mar 2016 08:27:18 +0000 (11:27 +0300)]
emacs: Use 'build-and-use-profile' from (guix scripts package).

* guix/scripts/package.scm: Export 'build-and-use-profile'.
* emacs/guix-main.scm (process-package-actions): Use it.

8 years agognu: python-pyopenssl: Update to 16.0.0.
Leo Famulari [Tue, 22 Mar 2016 22:11:08 +0000 (18:11 -0400)]
gnu: python-pyopenssl: Update to 16.0.0.

* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to
16.0.0.
[arguments]: Remove field.

8 years agognu: python-cryptography, python-cryptography-vectors: Update to 1.3.1.
Leo Famulari [Tue, 22 Mar 2016 22:09:55 +0000 (18:09 -0400)]
gnu: python-cryptography, python-cryptography-vectors: Update to 1.3.1.

These packages should be udpated together.

* gnu/packages/python.scm (python-cryptography): Update to 1.3.1.
(python-cryptogprahy-vectors): Update to 1.3.1.

8 years agognu: python-pytest: Update to 2.7.3.
Leo Famulari [Tue, 22 Mar 2016 22:08:51 +0000 (18:08 -0400)]
gnu: python-pytest: Update to 2.7.3.

* gnu/packages/python.scm (python-pytest, python2-pytest): Update to 2.7.3.

8 years agognu: i3-wm: Update to 4.12.
Efraim Flashner [Mon, 4 Apr 2016 07:24:31 +0000 (10:24 +0300)]
gnu: i3-wm: Update to 4.12.

* gnu/packages/wm.scm (13-wm): Update to 4.12.

8 years agognu: Move pspp from maths.scm to statistics.scm
John Darrington [Sat, 2 Apr 2016 13:22:25 +0000 (15:22 +0200)]
gnu: Move pspp from maths.scm to statistics.scm

* gnu/packages/maths.scm (pspp): Deleted.
* gnu/packages/statistics.scm (pspp): New variable.

8 years agognu: irssi: Update to 0.8.19.
Efraim Flashner [Mon, 4 Apr 2016 04:24:31 +0000 (07:24 +0300)]
gnu: irssi: Update to 0.8.19.

* gnu/packages/irc.scm (irssi): Update to 0.8.19.

8 years agognu: libpsl: Update to 0.13.0.
Efraim Flashner [Sun, 3 Apr 2016 20:35:29 +0000 (23:35 +0300)]
gnu: libpsl: Update to 0.13.0.

* gnu/packages/web.scm (libpsl): Update to 0.13.0.
[arguments]: Remove bootstrap phase.
[inputs]: Add python-2.
[native-inputs]: Remove autoconf, automake, gettext, which, libtool,
pkg-config.

8 years agognu: libsrtp: Update to 1.5.4 [fixes CVE-2015-6360].
Leo Famulari [Sun, 3 Apr 2016 07:06:40 +0000 (03:06 -0400)]
gnu: libsrtp: Update to 1.5.4 [fixes CVE-2015-6360].

* gnu/packages/telephony.scm (libsrtp): Update to 1.5.4.

8 years agognu: check: Update home page URL.
Jochem Raat [Sun, 3 Apr 2016 16:20:27 +0000 (18:20 +0200)]
gnu: check: Update home page URL.

* gnu/packages/check.scm (check)[home-page]: Update to new location.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: magit: Update to 2.6.0.
Alex Kost [Fri, 1 Apr 2016 09:14:39 +0000 (12:14 +0300)]
gnu: magit: Update to 2.6.0.

* gnu/packages/emacs.scm (magit): Update to 2.6.0.

8 years agognu: ffmpeg: Update to 3.0.0.
rain1 [Thu, 24 Mar 2016 16:24:03 +0000 (16:24 +0000)]
gnu: ffmpeg: Update to 3.0.0.

* gnu/packages/video.scm (ffmpeg): Update to 3.0.0.
[inputs]: Remove libquvi.
[arguments]: Remove '--enable-libquvi" configure flag, rename mipsdspri1
flag to mipsdsp.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
8 years agobuild: Distribute 'build-aux/test-driver.scm'.
Mathieu Lirzin [Sun, 3 Apr 2016 14:25:07 +0000 (16:25 +0200)]
build: Distribute 'build-aux/test-driver.scm'.

* Makefile.am (EXTRA_DIST): Add 'build-aux/test-driver.scm'.

8 years agobuild: Add a Guile custom test driver using SRFI-64.
Mathieu Lirzin [Mon, 26 Oct 2015 22:47:24 +0000 (23:47 +0100)]
build: Add a Guile custom test driver using SRFI-64.

Before that '.log' files for scheme tests were fragmented and not
included in test-suite.log.  This unifies the semantics of SRFI-64 API
with Automake test suite.

* build-aux/test-driver.scm: New file.
* Makefile.am (SCM_LOG_DRIVER, AM_SCM_LOG_DRIVER_FLAGS): New variables.
(SCM_LOG_COMPILER, AM_SCM_LOG_FLAGS): Delete variables.
(AM_TESTS_ENVIRONMENT): Set GUILE_AUTO_COMPILE to 0.
* test-env.in: Silence guix-daemon.
* doc/guix.texi (Running the Test Suite): Describe how to display the
detailed results.  Bug reports require only 'test-suite.log' file.
* tests/base32.scm, tests/build-utils.scm, tests/builders.scm,
tests/challenge.scm, tests/cpan.scm, tests/cpio.scm, tests/cran.scm,
tests/cve.scm, tests/derivations.scm, tests/elpa.scm,
tests/file-systems.scm, tests/gem.scm, tests/gexp.scm,
tests/gnu-maintenance.scm, tests/grafts.scm, tests/graph.scm,
tests/gremlin.scm, tests/hackage.scm, tests/hash.scm,
tests/import-utils.scm, tests/lint.scm, tests/monads.scm, tests/nar.scm,
tests/packages.scm, tests/pk-crypto.scm, tests/pki.scm,
tests/profiles.scm, tests/publish.scm, tests/pypi.scm,
tests/records.scm, tests/scripts-build.scm, tests/scripts.scm,
tests/services.scm, tests/sets.scm, tests/size.scm, tests/snix.scm,
tests/store.scm, tests/substitute.scm, tests/syscalls.scm,
tests/system.scm, tests/ui.scm, tests/union.scm, tests/upstream.scm,
tests/utils.scm: Don't exit at the end of test groups.
* tests/containers.scm: Likewise.  Use 'test-skip' instead of exiting
with error code 77.

8 years agognu: Remove duplicate python-pbr.
Ben Woodcroft [Sun, 3 Apr 2016 11:09:17 +0000 (21:09 +1000)]
gnu: Remove duplicate python-pbr.

This is a follow-up to commit 1ef09c0c75c61fd70a84667a845a652995b38a94.

* gnu/packages/openstack.scm (python-pbr, python2-pbr): Move from here ...
* gnu/packages/python.scm: ... to here.
(python-pbr, python2-pbr): Delete duplicate packages.

8 years agognu: fontconfig: Find fonts in the system profile.
Alex Kost [Sun, 3 Apr 2016 07:27:45 +0000 (10:27 +0300)]
gnu: fontconfig: Find fonts in the system profile.

Fixes <http://bugs.gnu.org/22927>.
Reported by myglc2 <myglc2@gmail.com>.

This also reverts commit e71ef7adaece7e132a5059139122b45083ea1b39.

* gnu/packages/fontutils.scm (fontconfig)[arguments]: Add
/run/current-system/profile/share/fonts to --with-add-fonts configure flag.
* gnu/system/shadow.scm (default-skeletons): Do not create "fonts.conf" file.

8 years agognu: python-lockfile: Update to 0.12.2.
Ben Woodcroft [Sun, 3 Apr 2016 06:02:49 +0000 (16:02 +1000)]
gnu: python-lockfile: Update to 0.12.2.

* gnu/packages/python.scm (python-lockfile): Update to 0.12.2.
[native-inputs]: Add python-pbr.
(python2-lockfile): Update to 0.12.2.
[native-inputs]: Add python2-setuptools, python2-pbr.

8 years agognu: python-lockfile Use 'python2-variant'.
Ben Woodcroft [Sun, 3 Apr 2016 05:55:44 +0000 (15:55 +1000)]
gnu: python-lockfile Use 'python2-variant'.

* gnu/packages/python.scm (python-lockfile): Use 'python2-variant'.
[properties]: New field.
(python2-lockfile): Use 'strip-python2-variant'.

8 years agognu: Add python-pbr.
Ben Woodcroft [Sun, 3 Apr 2016 05:15:40 +0000 (15:15 +1000)]
gnu: Add python-pbr.

* gnu/packages/python.scm (python-pbr, python2-pbr): New variables.

8 years agognu: python-pandas: Update to 0.18.0.
Ben Woodcroft [Sat, 2 Apr 2016 20:53:03 +0000 (06:53 +1000)]
gnu: python-pandas: Update to 0.18.0.

* gnu/packages/python.scm (python-pandas, python2-pandas): Update to 0.18.0.
[arguments]: Enable tests.

8 years agognu: pspp: Update to 0.10.1.
Efraim Flashner [Sun, 3 Apr 2016 05:47:35 +0000 (08:47 +0300)]
gnu: pspp: Update to 0.10.1.

* gnu/packages/maths.scm (pspp): Update to 0.10.1.

8 years agognu: iso-codes: Update to 3.67.
Efraim Flashner [Sun, 3 Apr 2016 04:43:41 +0000 (07:43 +0300)]
gnu: iso-codes: Update to 3.67.

* gnu/packages/iso-codes.scm (iso-codes): Update to 3.67.
[inputs]: Replace python-2 with python-wrapper.
[home-page]: Use https.

8 years agognu: transmission: Move '.desktop' file to the "gui" output.
Ludovic Courtès [Sat, 2 Apr 2016 20:37:15 +0000 (22:37 +0200)]
gnu: transmission: Move '.desktop' file to the "gui" output.

Fixes <http://bugs.gnu.org/23066>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/bittorrent.scm (transmission)[arguments]: In 'move-gui',
move 'share/applications' to the 'gui' output.

8 years agograph: Edges are colored based on their source node.
Ludovic Courtès [Sat, 2 Apr 2016 19:46:26 +0000 (21:46 +0200)]
graph: Edges are colored based on their source node.

* guix/graph.scm (%colors): New variable.
(pop-color): New procedure.
(emit-edge): Use it.

8 years agognu: mc: Update to 4.8.16.
Efraim Flashner [Sat, 2 Apr 2016 20:39:32 +0000 (23:39 +0300)]
gnu: mc: Update to 4.8.16.

* gnu/packages/mc.scm (mc): Update to 4.8.16.
[source]: Remove patch.
* gnu/packages/patches/mc-fix-ncurses-build.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.

8 years agognu: gnucash: Update to 2.6.12.
Efraim Flashner [Sat, 2 Apr 2016 19:10:13 +0000 (22:10 +0300)]
gnu: gnucash: Update to 2.6.12.

* gnu/packages/gnucash.scm (gnucash): Update to 2.6.12.
[home-page]: Update to new homepage.

8 years agognu: ruby-2.1: Update to 2.1.10.
Ben Woodcroft [Fri, 1 Apr 2016 23:16:17 +0000 (09:16 +1000)]
gnu: ruby-2.1: Update to 2.1.10.

* gnu/packages/ruby.scm (ruby-2.1): Update to 2.1.10.

8 years agognu: gzip: Update to 1.7.
Efraim Flashner [Fri, 1 Apr 2016 14:42:28 +0000 (17:42 +0300)]
gnu: gzip: Update to 1.7.

* gnu/packages/compression.scm (gzip): Update to 1.7.

8 years agognu: glpk: Update to 4.60.
Efraim Flashner [Fri, 1 Apr 2016 13:52:54 +0000 (16:52 +0300)]
gnu: glpk: Update to 4.60.

* gnu/packages/maths.scm (glpk): Update to 4.60.

8 years agognu: wicd: Add template for WPA2-TTLS.
Ludovic Courtès [Fri, 1 Apr 2016 08:13:13 +0000 (10:13 +0200)]
gnu: wicd: Add template for WPA2-TTLS.

* gnu/packages/patches/wicd-wpa2-ttls.patch: New file.
* gnu/packages/wicd.scm (wicd)[source]: Add it.
* gnu-system.am (dist_patch_DATA): Add it.

8 years agognu: wicd: Update to 1.7.4.
Ludovic Courtès [Fri, 1 Apr 2016 07:48:11 +0000 (09:48 +0200)]
gnu: wicd: Update to 1.7.4.

* gnu/packages/wicd.scm (wicd): Update to 1.7.4.
[source]: Remove 'wicd-template-instantiation.patch'.
* gnu/packages/patches/wicd-template-instantiation.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.

8 years agognu: postgresql: Update to 9.5.2. [fixes CVE-2016-2193, CVE-2016-3065]
Efraim Flashner [Fri, 1 Apr 2016 10:57:21 +0000 (13:57 +0300)]
gnu: postgresql: Update to 9.5.2. [fixes CVE-2016-2193, CVE-2016-3065]

* gnu/packages/databases.scm (postgresql): Update to 9.5.2.

8 years agognu: Add r-ztable.
Ricardo Wurmus [Fri, 18 Mar 2016 11:14:32 +0000 (12:14 +0100)]
gnu: Add r-ztable.

* gnu/packages/statistics.scm (r-ztable): New variable.

8 years agognu: Add jq.
Jelle Licht [Sat, 26 Mar 2016 21:49:42 +0000 (22:49 +0100)]
gnu: Add jq.

* gnu/packages/web.scm: (jq): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: Add oniguruma.
Jelle Licht [Sat, 26 Mar 2016 17:28:31 +0000 (18:28 +0100)]
gnu: Add oniguruma.

* gnu/packages/textutils.scm (oniguruma): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: fontforge: Build fonts bit-reproducibly.
alírio eyng [Thu, 24 Mar 2016 06:17:04 +0000 (06:17 +0000)]
gnu: fontforge: Build fonts bit-reproducibly.

* gnu/packages/fontutils.scm (fontforge)[source](snippet): Modify
tottf.c.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: move miscfiles into gnu-doc.scm
Jan Nieuwenhuizen [Sat, 26 Mar 2016 12:56:14 +0000 (13:56 +0100)]
gnu: move miscfiles into gnu-doc.scm

* gnu/packages/miscfiles.scm: Remove file.
* gnu-sytem.am: Remove it.
* gnu/packages/gnu-doc.scm (miscfiles): Move here.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: Add gnu-standards.
Jan Nieuwenhuizen [Wed, 23 Mar 2016 21:18:46 +0000 (22:18 +0100)]
gnu: Add gnu-standards.

* gnu/packages/gnu-doc.scm: New file.
* gnu-system.am: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agocvs: Disable compression.
Ludovic Courtès [Thu, 31 Mar 2016 21:52:15 +0000 (23:52 +0200)]
cvs: Disable compression.

Reported by Jan Nieuwenhuizen <janneke@gnu.org>.

* guix/build/cvs.scm (cvs-fetch): Use -z0.

8 years agocvs: Allow checkouts when /tmp is a different device.
Jan Nieuwenhuizen [Sat, 26 Mar 2016 12:40:38 +0000 (13:40 +0100)]
cvs: Allow checkouts when /tmp is a different device.

* guix/build/cvs.scm (cvs-fetch): Use 'copy-recursively' instead of
'rename-file'.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: font-gnu-freefont-ttf: Update to 20120503 and build from source.
alírio eyng [Thu, 31 Mar 2016 12:51:47 +0000 (12:51 +0000)]
gnu: font-gnu-freefont-ttf: Update to 20120503 and build from source.

* gnu/packages/fonts.scm (font-gnu-freefont-ttf): Update to 20120503.
[arguments]: Build from source.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agoprofiles: Use the right 'package-name->name+version'.
Ludovic Courtès [Thu, 31 Mar 2016 13:47:18 +0000 (15:47 +0200)]
profiles: Use the right 'package-name->name+version'.

* guix/profiles.scm: Use 'package-name->name+version' from (guix build
utils).  Fixes 'find-among-store-items' in 'gtk-icon-themes'.

8 years agognu: gnupg-2.0: Update to 2.0.30.
Efraim Flashner [Thu, 31 Mar 2016 18:14:25 +0000 (21:14 +0300)]
gnu: gnupg-2.0: Update to 2.0.30.

* gnu/packages/gnupg.scm (gnupg-2.0): Update to 2.0.30.

8 years agoant-build-system: Keep jar manifest.
Ricardo Wurmus [Thu, 24 Mar 2016 14:39:45 +0000 (15:39 +0100)]
ant-build-system: Keep jar manifest.

* guix/build/ant-build-system.scm (default-build.xml): Generate default
manifest.
(strip-jar-timestamps): Repack jar archive with zip.

8 years agobuild-system/ant: Add zip.
Ricardo Wurmus [Thu, 24 Mar 2016 14:33:21 +0000 (15:33 +0100)]
build-system/ant: Add zip.

* guix/build-system/ant.scm (default-zip): New variable.
(lower): Add zip to native inputs.

8 years agobuild-system/r: Support "substitutable?" flag.
Ricardo Wurmus [Thu, 31 Mar 2016 13:44:59 +0000 (15:44 +0200)]
build-system/r: Support "substitutable?" flag.

* guix/build-system/r.scm (r-build): Support the "substitutable?" flag.

8 years agognu: Add nmap.
Taylan Ulrich Bayırlı/Kammer [Thu, 19 Nov 2015 12:52:30 +0000 (13:52 +0100)]
gnu: Add nmap.

* gnu/packages/admin.scm (nmap): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
8 years agolicenses: Add the nmap license.
Leo Famulari [Sun, 31 Jan 2016 04:56:13 +0000 (23:56 -0500)]
licenses: Add the nmap license.

* guix/licenses.scm (nmap): New variable.

8 years agoimport: Add Hackage updater.
Eric Bavier [Wed, 23 Mar 2016 03:44:51 +0000 (22:44 -0500)]
import: Add Hackage updater.

* guix/import/hackage.scm (guix-package->hackage-name, hackage-package?)
  (latest-release): New procedures.
  (%hackage-updater): New variable.
* guix/scripts/refresh.scm (%updaters): Add it.
* doc/guix.texi (Invoking guix refresh): Mention it.

8 years agoimport: hackage: Silence download output.
Eric Bavier [Wed, 23 Mar 2016 03:38:54 +0000 (22:38 -0500)]
import: hackage: Silence download output.

* guix/import/hackage.scm (hackage-fetch): Use http-fetch to avoid
  progress output from url-fetch.

8 years agoimport: hackage: Factorize url synthesis.
Eric Bavier [Wed, 23 Mar 2016 03:40:38 +0000 (22:40 -0500)]
import: hackage: Factorize url synthesis.

* guix/import/hackage.scm (hackage-source-url, hackage-cabal-url): New
  procedures.
  (hackage-fetch, hackage-module->sexp): Use them.

8 years agodoc: Small fixes for typos and missing words.
Roel Janssen [Wed, 30 Mar 2016 12:27:52 +0000 (14:27 +0200)]
doc: Small fixes for typos and missing words.

* doc/guix.texi (The Store Monad): Add a dot at the end of a sentence.
  (The Store Monad): Add "are" to make a complete sentence.
  (G-Expressions): Fix typo.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agodoc: Clarify how to use the '#:python' parameter.
Chris Marusich [Wed, 30 Mar 2016 09:43:16 +0000 (02:43 -0700)]
doc: Clarify how to use the '#:python' parameter.

* doc/guix.texi (Build Systems): Clearly distinguish between the package that
provides the Python interpreter for the build and the package that is to be
built.  Also, mention why one might want to use a specific Python version.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: Add python2-s3cmd.
Chris Marusich [Mon, 28 Mar 2016 02:28:37 +0000 (19:28 -0700)]
gnu: Add python2-s3cmd.

* gnu/packages/python.scm (python2-s3cmd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agognu: Add python-magic.
Chris Marusich [Mon, 28 Mar 2016 02:10:48 +0000 (19:10 -0700)]
gnu: Add python-magic.

* gnu/packages/python.scm (python-magic, python2-magic): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
8 years agoui: Add comment on the translation of "current".
Ludovic Courtès [Wed, 30 Mar 2016 13:00:25 +0000 (15:00 +0200)]
ui: Add comment on the translation of "current".

* guix/ui.scm (display-generation): Add "TRANSLATORS" comment.

8 years agodoc: Fix URL of gnutls-guile one-page-per-node manual.
Ludovic Courtès [Wed, 30 Mar 2016 07:48:16 +0000 (09:48 +0200)]
doc: Fix URL of gnutls-guile one-page-per-node manual.

* doc/htmlxref.cnf: Fix gnutls-guile 'node' URL.

8 years agognu: Add MilkyTracker.
Kei Yamashita [Wed, 30 Mar 2016 02:17:21 +0000 (22:17 -0400)]
gnu: Add MilkyTracker.

* gnu/packages/music.scm (milkytracker): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
8 years agognu: python2-pbcore: Update to 1.2.8.
Efraim Flashner [Wed, 30 Mar 2016 19:45:35 +0000 (22:45 +0300)]
gnu: python2-pbcore: Update to 1.2.8.

* gnu/packages/bioinformatics.scm (python2-pbcore): Update to 1.2.8.
[native-inputs]: Add python2-docutils, python2-nose, python2-sphinx.

8 years agognu: linux-libre: Avoid introducing timestamps into the build.
rain1 [Wed, 30 Mar 2016 12:05:19 +0000 (13:05 +0100)]
gnu: linux-libre: Avoid introducing timestamps into the build.

* gnu/packages/linux.scm (linux-libre)[build-phase]: Set the
KCONFIG_NOTIMESTAMP and KBUILD_BUILD_TIMESTAMP environment variables to
avoid introducing timestamps into the build outputs.

8 years agoenvironment: Set a default value for PS1.
David Thompson [Mon, 28 Mar 2016 01:20:19 +0000 (21:20 -0400)]
environment: Set a default value for PS1.

* guix/scripts/environment.scm (launch-environment/container): Set PS1
  during container initialization.

8 years agognu: libcue: Fix source url.
Efraim Flashner [Wed, 30 Mar 2016 10:39:42 +0000 (13:39 +0300)]
gnu: libcue: Fix source url.

* gnu/packages/cdrom.scm (libcue)[source]: Fix url.
[home-page]: Project has moved to Github.

8 years agognu: r-devtools: Update to 1.10.0.
Roel Janssen [Tue, 29 Mar 2016 12:32:00 +0000 (14:32 +0200)]
gnu: r-devtools: Update to 1.10.0.

* gnu/packages/statistics.scm (r-devtools): Update to 1.10.0.
   (r-devtools)[propagated-inputs]: Add r-withr.

8 years agognu: Add r-withr.
Roel Janssen [Tue, 29 Mar 2016 12:30:38 +0000 (14:30 +0200)]
gnu: Add r-withr.

* gnu/packages/statistics.scm (r-withr): New variable.

8 years agognu: r-genomation: Update to 1.2.2.
Ricardo Wurmus [Wed, 30 Mar 2016 09:53:43 +0000 (11:53 +0200)]
gnu: r-genomation: Update to 1.2.2.

* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.

8 years agognu: r-genomicfeatures: Update to 1.22.13.
Ricardo Wurmus [Wed, 30 Mar 2016 09:53:09 +0000 (11:53 +0200)]
gnu: r-genomicfeatures: Update to 1.22.13.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
  1.22.13.

8 years agognu: r-rtracklayer: Update to 1.30.4.
Ricardo Wurmus [Wed, 30 Mar 2016 09:52:43 +0000 (11:52 +0200)]
gnu: r-rtracklayer: Update to 1.30.4.

* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.

8 years agognu: r-genomicalignments: Update to 1.6.3.
Ricardo Wurmus [Wed, 30 Mar 2016 09:52:18 +0000 (11:52 +0200)]
gnu: r-genomicalignments: Update to 1.6.3.

* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
  1.6.3.

8 years agognu: r-summarizedexperiment: Update to 1.0.2.
Ricardo Wurmus [Wed, 30 Mar 2016 09:51:54 +0000 (11:51 +0200)]
gnu: r-summarizedexperiment: Update to 1.0.2.

* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
  1.0.2.

8 years agognu: r-biostrings: Update to 2.38.4.
Ricardo Wurmus [Wed, 30 Mar 2016 09:51:27 +0000 (11:51 +0200)]
gnu: r-biostrings: Update to 2.38.4.

* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.

8 years agognu: r-genomicranges: Update to 1.22.4.
Ricardo Wurmus [Wed, 30 Mar 2016 09:50:59 +0000 (11:50 +0200)]
gnu: r-genomicranges: Update to 1.22.4.

* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.

8 years agognu: r-genomeinfodb: Update to 1.6.3.
Ricardo Wurmus [Wed, 30 Mar 2016 09:50:33 +0000 (11:50 +0200)]
gnu: r-genomeinfodb: Update to 1.6.3.

* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.

8 years agognu: libpaper: Update source url.
Efraim Flashner [Wed, 30 Mar 2016 07:49:03 +0000 (10:49 +0300)]
gnu: libpaper: Update source url.

Reported by shanemikel_ on irc.

* gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to
download from Fedora.
[home-page]: Use https.

8 years agognu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'.
Ludovic Courtès [Tue, 29 Mar 2016 20:11:59 +0000 (22:11 +0200)]
gnu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'.

Reported by <rain1@openmailbox.org>.

* gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '=
instead of 'prefix in call to 'wrap-program'.