jackhill/guix/guix.git
3 years agognu: cuirass: Disable tests on aarch64.
Mathieu Othacehe [Fri, 9 Apr 2021 12:25:50 +0000 (14:25 +0200)]
gnu: cuirass: Disable tests on aarch64.

* gnu/packages/ci.scm (cuirass)[arguments]: Disable tests on aarch64.

3 years agognu: gcc-10: Update to 10.3.0.
Efraim Flashner [Fri, 9 Apr 2021 12:06:35 +0000 (15:06 +0300)]
gnu: gcc-10: Update to 10.3.0.

* gnu/packages/gcc.scm (gcc-10): Update to 10.3.0.

3 years agognu: cuirass: Update to 1.0.0-9.d601fe0.
Mathieu Othacehe [Fri, 9 Apr 2021 11:39:32 +0000 (13:39 +0200)]
gnu: cuirass: Update to 1.0.0-9.d601fe0.

* gnu/packages/ci.scm (cuirass): Update to 1.0.0-9.d601fe0.

3 years agoservices: Add Laminar.
Christopher Baines [Sat, 10 Nov 2018 10:04:00 +0000 (10:04 +0000)]
services: Add Laminar.

* gnu/services/ci.scm: New file.
* gnu/tests/ci.scm: New file.
* doc/guix.texi (Laminar): Document the Laminar service.

3 years agognu: Add laminar.
Christopher Baines [Sat, 10 Nov 2018 10:03:35 +0000 (10:03 +0000)]
gnu: Add laminar.

* gnu/packages/ci.scm (laminar): New variable.

3 years agognu: guix-build-coordinator: Update to 0-24.6fb5eaf.
Christopher Baines [Fri, 9 Apr 2021 10:32:40 +0000 (11:32 +0100)]
gnu: guix-build-coordinator: Update to 0-24.6fb5eaf.

* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-24.6fb5eaf.

3 years agognu: guix-data-service: Update to 0.0.1-27.df2a0a7.
Christopher Baines [Fri, 9 Apr 2021 10:30:08 +0000 (11:30 +0100)]
gnu: guix-data-service: Update to 0.0.1-27.df2a0a7.

* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-27.df2a0a7.

3 years agognu: guix-build-coordinator: Update to 0-23.44d0006.
Christopher Baines [Fri, 9 Apr 2021 09:08:57 +0000 (10:08 +0100)]
gnu: guix-build-coordinator: Update to 0-23.44d0006.

* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-23.44d0006.
[arguments]: Fix missing guile-fibers when not building for the hurd.

3 years agognu: ardour: Update to 6.6.
Pierre Langlois [Mon, 5 Apr 2021 14:55:24 +0000 (15:55 +0100)]
gnu: ardour: Update to 6.6.

* gnu/packages/audio.scm (ardour): Update to 6.6.
[origin]: Use git protocol, https isn't available anymore.  Adapt snippet.
[arguments]: Add "--optimize" flags.  Switch to python3.
[inputs]: Add dbus, libwebsockets, openssl, pulseaudio and soundtouch.

3 years agognu: libwebsockets: Update to 4.1.6.
Pierre Langlois [Mon, 5 Apr 2021 14:53:12 +0000 (15:53 +0100)]
gnu: libwebsockets: Update to 4.1.6.

* gnu/packages/web.scm (libwebsockets): Update to 4.1.6.

3 years agognu: cuirass: Update to 1.0.0-8.7542d62.
Mathieu Othacehe [Fri, 9 Apr 2021 07:46:10 +0000 (09:46 +0200)]
gnu: cuirass: Update to 1.0.0-8.7542d62.

* gnu/packages/ci.scm (cuirass): Update to 1.0.0-8.7542d62.

3 years agognu: rust-rav1e-0.4.0: Fix build.
Leo Famulari [Fri, 9 Apr 2021 05:44:10 +0000 (01:44 -0400)]
gnu: rust-rav1e-0.4.0: Fix build.

Fixes <https://bugs.gnu.org/47667>.

* gnu/packages/crates-graphics.scm (rust-rav1e-0.4)[arguments]: Add
rust-assert-cmd-1, rust-criterion-0.3, and rust-pretty-assertions-0.6
to #:cargo-inputs.

3 years agognu: Add galera.
methuselah-0 [Wed, 31 Mar 2021 10:38:50 +0000 (12:38 +0200)]
gnu: Add galera.

* gnu/packages/databases.scm (galera): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
3 years agobuild-system/qt: Wrappers set 'QTWEBENGINEPROCESS_PATH' if needed.
Ludovic Courtès [Thu, 8 Apr 2021 20:23:21 +0000 (22:23 +0200)]
build-system/qt: Wrappers set 'QTWEBENGINEPROCESS_PATH' if needed.

Suggested by Maxim Cournoyer <maxim.cournoyer@gmail.com>.

* guix/build/qt-build-system.scm (variables-for-wrapping): Add
"QTWEBENGINEPROCESS_PATH".

3 years agobuild-system/qt: Wrappers only include relevant directories to XDG_DATA_DIRS.
Ludovic Courtès [Thu, 8 Apr 2021 20:17:03 +0000 (22:17 +0200)]
build-system/qt: Wrappers only include relevant directories to XDG_DATA_DIRS.

Fixes <https://bugs.gnu.org/47569>.

Previously the wrapper's XDG_DATA_DIRS would contain any input that had
a /share sub-directory, which is usually all build-time inputs.

* guix/build/qt-build-system.scm (variables-for-wrapping)[collect-sub-dirs]:
Add 'selectors' parameter and honor it.  Change caller to handle
selectors.  Add selectors for /share.

3 years agognu-maintenance: 'sourceforge' updater reuses the same connection.
Ludovic Courtès [Thu, 8 Apr 2021 07:34:03 +0000 (09:34 +0200)]
gnu-maintenance: 'sourceforge' updater reuses the same connection.

* guix/gnu-maintenance.scm (latest-sourceforge-release): Call
'open-socket-for-uri' upfront.  Pass #:port and #:keep-alive? to
'http-head'.  Wrap body in 'dynamic-wind' and call 'close-port' upon
exit.

3 years agognu: emacs-emms: Update to 7.0.
Nicolas Goaziou [Thu, 8 Apr 2021 20:16:05 +0000 (22:16 +0200)]
gnu: emacs-emms: Update to 7.0.

* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 7.0.

3 years agognu: guix-build-coordinator: Update to 0-22.44d0006.
Christopher Baines [Thu, 8 Apr 2021 19:49:56 +0000 (20:49 +0100)]
gnu: guix-build-coordinator: Update to 0-22.44d0006.

* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-22.44d0006.

3 years agognu: linux-libre 4.4: Update to 4.4.265.
Leo Famulari [Wed, 7 Apr 2021 17:36:06 +0000 (13:36 -0400)]
gnu: linux-libre 4.4: Update to 4.4.265.

* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.265.
(linux-libre-4.4-pristine-source): Update hash.

3 years agognu: linux-libre 4.9: Update to 4.9.265.
Leo Famulari [Wed, 7 Apr 2021 17:35:52 +0000 (13:35 -0400)]
gnu: linux-libre 4.9: Update to 4.9.265.

* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.265.
(linux-libre-4.9-pristine-source): Update hash.

3 years agognu: linux-libre 4.14: Update to 4.14.229.
Leo Famulari [Wed, 7 Apr 2021 17:35:17 +0000 (13:35 -0400)]
gnu: linux-libre 4.14: Update to 4.14.229.

* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.229.
(linux-libre-4.14-pristine-source): Update hash.

3 years agognu: linux-libre 4.19: Update to 4.19.185.
Leo Famulari [Wed, 7 Apr 2021 17:34:53 +0000 (13:34 -0400)]
gnu: linux-libre 4.19: Update to 4.19.185.

* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.185.
(linux-libre-4.19-pristine-source): Update hash.

3 years agognu: linux-libre 5.4: Update to 5.4.110.
Leo Famulari [Wed, 7 Apr 2021 17:34:34 +0000 (13:34 -0400)]
gnu: linux-libre 5.4: Update to 5.4.110.

* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.110.
(linux-libre-5.4-pristine-source): Update hash.

3 years agognu: linux-libre 5.10: Update to 5.10.28.
Leo Famulari [Wed, 7 Apr 2021 17:34:19 +0000 (13:34 -0400)]
gnu: linux-libre 5.10: Update to 5.10.28.

* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.28.
(linux-libre-5.10-pristine-source): Update hash.

3 years agognu: linux-libre: Update to 5.11.12.
Leo Famulari [Wed, 7 Apr 2021 17:33:59 +0000 (13:33 -0400)]
gnu: linux-libre: Update to 5.11.12.

* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.12.
(linux-libre-5.11-pristine-source): Update hash.

3 years agosystem: vm: Set a larger value for the msize option of the 9p file system.
Maxim Cournoyer [Tue, 6 Apr 2021 21:37:33 +0000 (17:37 -0400)]
system: vm: Set a larger value for the msize option of the 9p file system.

Fixes <https://issues.guix.gnu.org/47225>.

* gnu/system/vm.scm (%default-msize-value): New variable.
(%linux-vm-file-systems): Use it as the value of the msize option.
(mapping->file-system): Likewise.

Reported-by: Leo Famulari <leo@famulari.name>
3 years agoetc/committer: Disable diff colors.
Ricardo Wurmus [Thu, 8 Apr 2021 15:11:14 +0000 (17:11 +0200)]
etc/committer: Disable diff colors.

Reported by: morgansmith on IRC.

* etc/committer.scm.in (diff-info): Invoke "git diff" with "--no-color".

3 years agoci: Introduce new subsets.
Mathieu Othacehe [Thu, 8 Apr 2021 12:08:54 +0000 (14:08 +0200)]
ci: Introduce new subsets.

Introduce 'images, 'system-tests and 'tarball subsets.

* gnu/ci.scm (cuirass-jobs): Break the 'all subset into smaller subsets.

3 years agoci: Remove the job period argument.
Mathieu Othacehe [Thu, 8 Apr 2021 12:03:50 +0000 (14:03 +0200)]
ci: Remove the job period argument.

Cuirass now deals with periodicity directly on specifications.

* gnu/ci.scm (derivation->job): Remove the period argument.
(image-jobs, system-test-jobs, tarball-jobs): Adapt them.

3 years agognu: r-genomicfeatures: Update to 1.42.3.
Ricardo Wurmus [Thu, 8 Apr 2021 11:28:00 +0000 (13:28 +0200)]
gnu: r-genomicfeatures: Update to 1.42.3.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.42.3.

3 years agognu: r-gviz: Update to 1.34.1.
Ricardo Wurmus [Thu, 8 Apr 2021 11:28:00 +0000 (13:28 +0200)]
gnu: r-gviz: Update to 1.34.1.

* gnu/packages/bioconductor.scm (r-gviz): Update to 1.34.1.

3 years agognu: r-universalmotif: Update to 1.8.4.
Ricardo Wurmus [Thu, 8 Apr 2021 11:28:00 +0000 (13:28 +0200)]
gnu: r-universalmotif: Update to 1.8.4.

* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.4.

3 years agognu: r-rsubread: Update to 2.4.3.
Ricardo Wurmus [Thu, 8 Apr 2021 11:28:00 +0000 (13:28 +0200)]
gnu: r-rsubread: Update to 2.4.3.

* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.3.

3 years agognu: r-chippeakanno: Update to 3.24.2.
Ricardo Wurmus [Thu, 8 Apr 2021 11:28:00 +0000 (13:28 +0200)]
gnu: r-chippeakanno: Update to 3.24.2.

* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.2.
[propagated-inputs]: Add r-dplyr.

3 years agognu: r-diffbind: Update to 3.0.15.
Ricardo Wurmus [Thu, 8 Apr 2021 11:27:59 +0000 (13:27 +0200)]
gnu: r-diffbind: Update to 3.0.15.

* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.15.

3 years agognu: r-genomeinfodb: Update to 1.26.6.
Ricardo Wurmus [Thu, 8 Apr 2021 11:27:59 +0000 (13:27 +0200)]
gnu: r-genomeinfodb: Update to 1.26.6.

* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.6.

3 years agognu: r-delayedarray: Update to 0.16.3.
Ricardo Wurmus [Thu, 8 Apr 2021 11:27:56 +0000 (13:27 +0200)]
gnu: r-delayedarray: Update to 0.16.3.

* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.16.3.

3 years agognu: Add texlive-mweights.
Paul Garlick [Thu, 8 Apr 2021 10:13:11 +0000 (11:13 +0100)]
gnu: Add texlive-mweights.

* gnu/packages/tex.scm: New variable.

3 years agognu: axoloti-runtime: Simplify build.
Morgan Smith [Wed, 7 Apr 2021 18:14:56 +0000 (14:14 -0400)]
gnu: axoloti-runtime: Simplify build.

* gnu/packages/axoloti.scm (axoloti-runtime)[arguments]: Remove
unnecessary environment variable assignments in custom 'build phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agognu: gcc-arm-none-eabi: Fix C++ header location.
Morgan Smith [Wed, 7 Apr 2021 19:09:46 +0000 (15:09 -0400)]
gnu: gcc-arm-none-eabi: Fix C++ header location.

Previously the C++ headers where installed in the include folder, overwriting
some C headers.

* gnu/packages/embedded.scm (gcc-arm-none-eabi-4.9)
[native-search-paths]: Add C++ header locations.
(gcc-arm-none-eabi-7-2018-q2-update)[native-search-paths]: Add C++
header locations.
(make-libstdc++-arm-none-eabi)[arguments]: Change C++ header install
location to include/c++.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agoetc/committer: Recompute hunks before processing changes.
Ricardo Wurmus [Thu, 8 Apr 2021 01:08:00 +0000 (03:08 +0200)]
etc/committer: Recompute hunks before processing changes.

* etc/committer.scm.in (main): Re-evaluate diff-info after processing
insertions.

3 years agoetc/committer: Record minimal context for hunks to avoid problems.
Ricardo Wurmus [Thu, 8 Apr 2021 01:00:57 +0000 (03:00 +0200)]
etc/committer: Record minimal context for hunks to avoid problems.

With zero context new definitions would be applied to the wrong location in
the file.  More context lines lead to larger hunks, though, so we use just one
line of context.

* etc/committer.scm.in (diff-info): Invoke "git diff" with one line of
context.
[info]: Merge line break and first line.
(lines-to-first-change): New procedure.
(old-sexp, new-sexp): Use it.

3 years agoetc/committer: Define delay duration as a variable.
Ricardo Wurmus [Thu, 8 Apr 2021 00:59:55 +0000 (02:59 +0200)]
etc/committer: Define delay duration as a variable.

* etc/committer.scm.in (%delay): New variable.
(main): Use it.

3 years agoetc/committer: Handle package additions.
Ricardo Wurmus [Wed, 7 Apr 2021 19:20:55 +0000 (21:20 +0200)]
etc/committer: Handle package additions.

* etc/committer.scm.in (<hunk>)[diff]: Rename this field...
[diff-lines]: ...to this.
[definition?]: New field.
(hunk->patch): Join diff lines.
(diff-info): Do not join diff lines; record whether a hunk is a new
definition.
(commit-message): Rename this procedure...
(change-commit-message): ...to this.
(add-commit-message): New procedure.
(main): Handle new package definitions before changes.

3 years agognu: r-sn: Update to 2.0.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:51 +0000 (02:53 +0200)]
gnu: r-sn: Update to 2.0.0.

* gnu/packages/statistics.scm (r-sn): Update to 2.0.0.

3 years agognu: r-sfsmisc: Update to 1.1-10.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:51 +0000 (02:53 +0200)]
gnu: r-sfsmisc: Update to 1.1-10.

* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-10.

3 years agognu: r-e1071: Update to 1.7-6.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:51 +0000 (02:53 +0200)]
gnu: r-e1071: Update to 1.7-6.

* gnu/packages/statistics.scm (r-e1071): Update to 1.7-6.
[propagated-inputs]: Add r-proxy.

3 years agognu: r-xml: Update to 3.99-0.6.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:51 +0000 (02:53 +0200)]
gnu: r-xml: Update to 3.99-0.6.

* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.6.

3 years agognu: r-rsqlite: Update to 2.2.5.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-rsqlite: Update to 2.2.5.

* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.5.

3 years agognu: r-catools: Update to 1.18.2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-catools: Update to 1.18.2.

* gnu/packages/statistics.scm (r-catools): Update to 1.18.2.

3 years agognu: r-dbplyr: Update to 2.1.1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-dbplyr: Update to 2.1.1.

* gnu/packages/statistics.scm (r-dbplyr): Update to 2.1.1.

3 years agognu: r-survival: Update to 3.2-10.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-survival: Update to 3.2-10.

* gnu/packages/statistics.scm (r-survival): Update to 3.2-10.

3 years agognu: r-stars: Update to 0.5-2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-stars: Update to 0.5-2.

* gnu/packages/cran.scm (r-stars): Update to 0.5-2.

3 years agognu: r-lwgeom: Update to 0.2-6.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-lwgeom: Update to 0.2-6.

* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-6.
[inputs]: Add zlib.

3 years agognu: r-ragg: Update to 1.1.2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:50 +0000 (02:53 +0200)]
gnu: r-ragg: Update to 1.1.2.

* gnu/packages/cran.scm (r-ragg): Update to 1.1.2.

3 years agognu: r-textshaping: Update to 0.3.3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:49 +0000 (02:53 +0200)]
gnu: r-textshaping: Update to 0.3.3.

* gnu/packages/cran.scm (r-textshaping): Update to 0.3.3.

3 years agognu: r-bbotk: Update to 0.3.2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:49 +0000 (02:53 +0200)]
gnu: r-bbotk: Update to 0.3.2.

* gnu/packages/cran.scm (r-bbotk): Update to 0.3.2.

3 years agognu: r-mlr3learners: Update to 0.4.5.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:49 +0000 (02:53 +0200)]
gnu: r-mlr3learners: Update to 0.4.5.

* gnu/packages/cran.scm (r-mlr3learners): Update to 0.4.5.

3 years agognu: r-mlr3misc: Update to 0.8.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:49 +0000 (02:53 +0200)]
gnu: r-mlr3misc: Update to 0.8.0.

* gnu/packages/cran.scm (r-mlr3misc): Update to 0.8.0.

3 years agognu: r-phangorn: Update to 2.6.3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:48 +0000 (02:53 +0200)]
gnu: r-phangorn: Update to 2.6.3.

* gnu/packages/cran.scm (r-phangorn): Update to 2.6.3.
[native-inputs]: Add r-knitr.

3 years agognu: r-qtl: Update to 1.48-1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:48 +0000 (02:53 +0200)]
gnu: r-qtl: Update to 1.48-1.

* gnu/packages/cran.scm (r-qtl): Update to 1.48-1.

3 years agognu: r-altmeta: Update to 3.3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:48 +0000 (02:53 +0200)]
gnu: r-altmeta: Update to 3.3.

* gnu/packages/cran.scm (r-altmeta): Update to 3.3.

3 years agognu: r-tidyposterior: Update to 0.1.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:53:48 +0000 (02:53 +0200)]
gnu: r-tidyposterior: Update to 0.1.0.

* gnu/packages/cran.scm (r-tidyposterior): Update to 0.1.0.
[propagated-inputs]: Remove r-lifecycle; add r-tune and r-workflowsets.

3 years agognu: r-slider: Update to 0.2.1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:03 +0000 (02:26 +0200)]
gnu: r-slider: Update to 0.2.1.

* gnu/packages/cran.scm (r-slider): Update to 0.2.1.
[propagated-inputs]: Add r-ellipsis.

3 years agognu: r-yardstick: Update to 0.0.8.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:02 +0000 (02:26 +0200)]
gnu: r-yardstick: Update to 0.0.8.

* gnu/packages/cran.scm (r-yardstick): Update to 0.0.8.
[propagated-inputs]: Add r-vctrs.

3 years agognu: r-muhaz: Update to 1.2.6.3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:02 +0000 (02:26 +0200)]
gnu: r-muhaz: Update to 1.2.6.3.

* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.3.

3 years agognu: r-cpp11: Update to 0.2.7.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:02 +0000 (02:26 +0200)]
gnu: r-cpp11: Update to 0.2.7.

* gnu/packages/cran.scm (r-cpp11): Update to 0.2.7.

3 years agognu: r-spatstat: Update to 2.1-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:02 +0000 (02:26 +0200)]
gnu: r-spatstat: Update to 2.1-0.

* gnu/packages/cran.scm (r-spatstat): Update to 2.1-0.

3 years agognu: r-spatstat-linnet: Update to 2.1-1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:01 +0000 (02:26 +0200)]
gnu: r-spatstat-linnet: Update to 2.1-1.

* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.1-1.

3 years agognu: r-spatstat-core: Update to 2.0-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:01 +0000 (02:26 +0200)]
gnu: r-spatstat-core: Update to 2.0-0.

* gnu/packages/cran.scm (r-spatstat-core): Update to 2.0-0.

3 years agognu: r-spatstat-geom: Update to 2.0-1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:01 +0000 (02:26 +0200)]
gnu: r-spatstat-geom: Update to 2.0-1.

* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.0-1.
[propagated-inputs]: Remove r-spatstat-sparse.

3 years agognu: r-spatstat-data: Update to 2.1-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:01 +0000 (02:26 +0200)]
gnu: r-spatstat-data: Update to 2.1-0.

* gnu/packages/cran.scm (r-spatstat-data): Update to 2.1-0.

3 years agognu: r-spatstat-sparse: Update to 2.0-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:01 +0000 (02:26 +0200)]
gnu: r-spatstat-sparse: Update to 2.0-0.

* gnu/packages/cran.scm (r-spatstat-sparse): Update to 2.0-0.

3 years agognu: r-spatstat-utils: Update to 2.1-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:00 +0000 (02:26 +0200)]
gnu: r-spatstat-utils: Update to 2.1-0.

* gnu/packages/cran.scm (r-spatstat-utils): Update to 2.1-0.

3 years agognu: r-shapforxgboost: Update to 0.1.1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:00 +0000 (02:26 +0200)]
gnu: r-shapforxgboost: Update to 0.1.1.

* gnu/packages/cran.scm (r-shapforxgboost): Update to 0.1.1.
[propagated-inputs]: Remove r-lightgbm.
[native-inputs]: Add r-knitr.

3 years agognu: r-lightgbm: Update to 3.2.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:00 +0000 (02:26 +0200)]
gnu: r-lightgbm: Update to 3.2.0.

* gnu/packages/cran.scm (r-lightgbm): Update to 3.2.0.

3 years agognu: r-latex2exp: Update to 0.5.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:26:00 +0000 (02:26 +0200)]
gnu: r-latex2exp: Update to 0.5.0.

* gnu/packages/cran.scm (r-latex2exp): Update to 0.5.0.
[native-inputs]: Add r-knitr.

3 years agognu: r-packrat: Update to 0.6.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:59 +0000 (02:25 +0200)]
gnu: r-packrat: Update to 0.6.0.

* gnu/packages/cran.scm (r-packrat): Update to 0.6.0.

3 years agognu: r-quanteda: Update to 3.0.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:59 +0000 (02:25 +0200)]
gnu: r-quanteda: Update to 3.0.0.

* gnu/packages/cran.scm (r-quanteda): Update to 3.0.0.
[propagated-inputs]: Remove r-data-table, r-digest, r-extrafont, r-ggplot2,
r-ggrepel, r-jsonlite, r-network, r-proxyc, and r-sna.

3 years agognu: r-shapes: Update to 1.2.6.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:59 +0000 (02:25 +0200)]
gnu: r-shapes: Update to 1.2.6.

* gnu/packages/cran.scm (r-shapes): Update to 1.2.6.

3 years agognu: r-univoutl: Update to 0.3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:59 +0000 (02:25 +0200)]
gnu: r-univoutl: Update to 0.3.

* gnu/packages/cran.scm (r-univoutl): Update to 0.3.

3 years agognu: r-imager: Update to 0.42.8.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:58 +0000 (02:25 +0200)]
gnu: r-imager: Update to 0.42.8.

* gnu/packages/cran.scm (r-imager): Update to 0.42.8.

3 years agognu: r-actuar: Update to 3.1-2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:58 +0000 (02:25 +0200)]
gnu: r-actuar: Update to 3.1-2.

* gnu/packages/cran.scm (r-actuar): Update to 3.1-2.

3 years agognu: r-gamlss: Update to 5.3-4.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:58 +0000 (02:25 +0200)]
gnu: r-gamlss: Update to 5.3-4.

* gnu/packages/cran.scm (r-gamlss): Update to 5.3-4.

3 years agognu: r-gamlss-data: Update to 6.0-1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:58 +0000 (02:25 +0200)]
gnu: r-gamlss-data: Update to 6.0-1.

* gnu/packages/cran.scm (r-gamlss-data): Update to 6.0-1.

3 years agognu: r-dalex: Update to 2.2.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:58 +0000 (02:25 +0200)]
gnu: r-dalex: Update to 2.2.0.

* gnu/packages/cran.scm (r-dalex): Update to 2.2.0.

3 years agognu: r-dae: Update to 3.1-37.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:57 +0000 (02:25 +0200)]
gnu: r-dae: Update to 3.1-37.

* gnu/packages/cran.scm (r-dae): Update to 3.1-37.

3 years agognu: r-styler: Update to 1.4.1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:57 +0000 (02:25 +0200)]
gnu: r-styler: Update to 1.4.1.

* gnu/packages/cran.scm (r-styler): Update to 1.4.1.
[native-inputs]: Add r-knitr.

3 years agognu: r-tweenr: Update to 1.0.2.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:57 +0000 (02:25 +0200)]
gnu: r-tweenr: Update to 1.0.2.

* gnu/packages/cran.scm (r-tweenr): Update to 1.0.2.

3 years agognu: r-rms: Update to 6.2-0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:56 +0000 (02:25 +0200)]
gnu: r-rms: Update to 6.2-0.

* gnu/packages/cran.scm (r-rms): Update to 6.2-0.

3 years agognu: r-spdep: Update to 1.1-7.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:56 +0000 (02:25 +0200)]
gnu: r-spdep: Update to 1.1-7.

* gnu/packages/cran.scm (r-spdep): Update to 1.1-7.

3 years agognu: r-sf: Update to 0.9-8.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:56 +0000 (02:25 +0200)]
gnu: r-sf: Update to 0.9-8.

* gnu/packages/cran.scm (r-sf): Update to 0.9-8.

3 years agognu: r-units: Update to 0.7-1.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:56 +0000 (02:25 +0200)]
gnu: r-units: Update to 0.7-1.

* gnu/packages/cran.scm (r-units): Update to 0.7-1.

3 years agognu: r-rmpfr: Update to 0.8-3.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:55 +0000 (02:25 +0200)]
gnu: r-rmpfr: Update to 0.8-3.

* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-3.

3 years agognu: r-gargle: Update to 1.1.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:55 +0000 (02:25 +0200)]
gnu: r-gargle: Update to 1.1.0.

* gnu/packages/cran.scm (r-gargle): Update to 1.1.0.
[propagated-inputs]: Add r-cli, r-rappdirs, and r-rstudioapi.

3 years agognu: r-tiff: Update to 0.1-8.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:55 +0000 (02:25 +0200)]
gnu: r-tiff: Update to 0.1-8.

* gnu/packages/cran.scm (r-tiff): Update to 0.1-8.
[native-inputs]: Add pkg-config.

3 years agognu: r-biocmanager: Update to 1.30.12.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:55 +0000 (02:25 +0200)]
gnu: r-biocmanager: Update to 1.30.12.

* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.12.
[native-inputs]: Add r-knitr.

3 years agognu: r-summarytools: Update to 0.9.9.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:54 +0000 (02:25 +0200)]
gnu: r-summarytools: Update to 0.9.9.

* gnu/packages/cran.scm (r-summarytools): Update to 0.9.9.

3 years agognu: r-remotes: Update to 2.3.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:54 +0000 (02:25 +0200)]
gnu: r-remotes: Update to 2.3.0.

* gnu/packages/cran.scm (r-remotes): Update to 2.3.0.

3 years agognu: r-gert: Update to 1.3.0.
Ricardo Wurmus [Thu, 8 Apr 2021 00:25:54 +0000 (02:25 +0200)]
gnu: r-gert: Update to 1.3.0.

* gnu/packages/cran.scm (r-gert): Update to 1.3.0.