gnu: emacs-minimal: Reduce to minimal inputs.

This partly reverts dbcba75c0e96d8eb2b0bf9dbb3a49d15b38f80d2.  In that commit,
emacs-minimal gained a few inputs that weren't actually used as native
compilation is disabled.
Discovered by djeis in IRC, see also
<http://logs.guix.gnu.org/guix/2022-10-02.log#170047>.

* gnu/packages/emacs.scm (emacs-minimal)[inputs]: Remove ld-wrapper, binutils,
glibc, libgccjit, and zlib.
[arguments]<#:phases>: Delete ‘set-libgccjit-path’.

gnu: IceCat, Icedove: Use the default 'rust'.

* gnu/packages/gnuzilla.scm (rust-1.58-promise, rust-1.59-promise): Remove variables.
(icecat, icedove)[native-inputs]: Change from RUST-1.59-PROMISE to RUST.

Merge branch 'master' into staging

services: Add file system utilities to profile.

* gnu/services/base.scm (file-system-type->utilities)
(file-system-utilities): New procedures.
(file-system-service-type): Extend 'profile-service-type' with
'file-system-utilities'.
* gnu/system.scm (boot-file-system-service): New procedure.
(operating-system-default-essential-services): Use it.
(%base-packages): Remove 'e2fsprogs'.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: icecat: Remove leftovers from version 91.

* gnu/packages/gnuzilla.scm (all-mozilla-91-locales, %icecat-91-version,
icecat-91-source): Remove variables.

gnu: icedove: Update to 102.3.0.

* gnu/packages/gnuzilla.scm (icedove): Update to 102.3.0.
[source]: Use icecat-source again.
[arguments]: Remove `--frozen` flag from cargo invokation.
Remove `--with-user-appdir` flag (no longer honoured since TB91). Disable
WASM sandbox for now (needs more dependencies).
[inputs]: Add alsa-lib. Use icu4c-71.
[native-inputs]: Update hg-reference link. Use rust@1.59 and
rust-cbindgen@0.23.

gnu: Add gnome-shell-extension-unite-shell.

* gnu/packages/gnome-xyz.scm (gnome-shell-extension-unite-shell): New
variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: Add texlive-babel-czech.

* gnu/packages/tex.scm (texlive-babel-czech): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

doc: Tweak wsdd wording.

* doc/guix.texi (Samba Services)[Web Service Discovery Daemon]: Tweak
wording.

doc: Fix syntax for 'wsdd-configuration'.

* doc/guix.texi (Samba Services): Fix syntax of 'wsdd-configuration'
data type definition.

gnu: wpa-supplicant: Enable OWE support.

With OWE support users are enable to connect to "Opportunistic Wireless
Encryption" networks. This means users are able to have an encrypted
data channel in an otherwise open wireless network.

* gnu/packages/admin.scm (wpa-supplicant)[arguments]: Rename
'configure-for-dbus' phase to 'set-config-options'.  Set CONFIG_OWE=y.
Remove trailing #t.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>

substitute: Retry downloading when a nar is unavailable.

Fixes <https://issues.guix.gnu.org/57978>
Reported by Attila Lendvai <attila@lendvai.name>.

Previously, if a narinfo was available but its corresponding nar was
missing (for instance because the narinfo was cached and the server
became unreachable in the meantime), 'guix substitute --substitute'
would try to download the nar from its preferred location and abort when
that fails.  This change forces one retry with each of the URLs.

* guix/scripts/substitute.scm (download-nar): Do not catch
'http-get-error?' exceptions.
(system-error?, network-error?, process-substitution/fallback): New
procedures.
(process-substitution): Call 'process-substitution/fallback' upon
'network-error?'.
* tests/substitute.scm ("substitute, first URL has narinfo but lacks nar, second URL unauthorized")
("substitute, first URL has narinfo but nar is 404, both URLs authorized")
("substitute, first URL has narinfo but nar is 404, one URL authorized")
("substitute, narinfo is available but nar is missing"): New tests.

substitute: Split nar download.

* guix/scripts/substitute.scm (download-nar): New procedure, with most
of the code moved from...
(process-substitution): ... here.  Call it.

import/cran: Process more complex license strings.

* guix/import/cran.scm (string->license): Add more match clauses.
(string->licenses): Split license conjunctions at "|" and apply
string->license on each license.
(description->package): Use string->licenses.

import/cran: Use beautify-synopsis.

* guix/import/cran.scm (description->package): Use beautify-synopsis.

import/utils: Add beautify-synopsis.

* guix/import/utils.scm (beautify-synopsis): New procedure.

import/cran: Transform external package names to Guix names.

* guix/import/cran.scm (transform-sysname): New procedure.
(description->package): Use it on inputs that are derived from "sysdepends".

import/cran: Add more strings to invalid-packages.

* guix/import/cran.scm (invalid-packages): Add none, windows, and xcode.

gnu: Add r-ggghost.

* gnu/packages/cran.scm (r-ggghost): New variable.

gnu: Add r-animation.

* gnu/packages/cran.scm (r-animation): New variable.

gnu: Add js-scianimator.

* gnu/packages/javascript.scm (js-scianimator): New variable.

gnu: Add r-ggthemeassist.

* gnu/packages/cran.scm (r-ggthemeassist): New variable.

gnu: Add r-bundesligr.

* gnu/packages/cran.scm (r-bundesligr): New variable.

gnu: Add r-pbdmpi.

* gnu/packages/cran.scm (r-pbdmpi): New variable.

gnu: Add r-rlecuyer.

* gnu/packages/cran.scm (r-rlecuyer): New variable.

gnu: Add acpilight.

* gnu/packages/linux.scm (acpilight): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: evolution: Add missing input.

In commit e4bf10ab0bc7c397fe7cbc52aea87d5ea2dfda7d, libnotify was removed
(and the removal documented).  This led to desktop notifications no longer
popping up for received emails.  Re-adding libnotify fixes this.

* gnu/packages/gnome.scm (evolution)[inputs]: Add libnotify.

gnu: Add btop.

* gnu/packages/admin.scm (btop): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: Add elm-community-random-extra.

* gnu/packages/elm.scm (elm-community-random-extra): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: ungoogled-chromium: Update to 106.0.5249.61-1.

* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M106.
(%chromium-version): Set to 106.0.5249.61.
(%arch-revision): New variable.
(%ungoogled-origin): Update hash.
(%chromium-gcc-patchset): Update to chromium-106-patchset-3.
(%gcc-patches): Adjust accordingly.
(arch-patch): New procedure.
(%ungoogled-chromium-unroll-ffmpeg.patch): Remove variable.
(%reverse-patches): New variable.
(ungoogled-chromium-snippet): Apply %REVERSE-PATCHES instead of just the one.
(ungoogled-chromium): Update hash.
[arguments]: Adjust compiler flags and header inclusions.

gnu: expat: Update replacement to 2.4.9 [fixes CVE-2022-40674].

* gnu/packages/xml.scm (expat/fixed): Update to 2.4.9.

gnu: gnome: Sort propagated inputs alphabetically within categories.

* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Sort alphabetically
within categories.

gnu: telegram: Remove unused variables.

* gnu/packages/telegram.scm (lib-rlottie-for-telegram-desktop)
(lib-waylandshells-for-telegram-desktop,libtgvoip-for-telegram-desktop):
Remove variables.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: telegram-desktop: Sort inputs alphabetically.

* gnu/packages/telegram.scm (telegram-desktop)[inputs]: Sort inputs
alphabetically.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: telegram-desktop: Update to 4.2.2.

* gnu/packages/patches/telegram-desktop-allow-disable-libtgvoip.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/telegram.scm (tgcalls-for-telegram-desktop)
(codegen-for-telegram-desktop,lib-base-for-telegram-desktop)
(lib-crl-for-telegram-desktop,lib-lottie-for-telegram-desktop)
(lib-qr-for-telegram-desktop,lib-rpl-for-telegram-desktop)
(lib-spellcheck-for-telegram-desktop,lib-storage-for-telegram-desktop)
(lib-tl-for-telegram-desktop,lib-ui-for-telegram-desktop)
(lib-webrtc-for-telegram-desktop,lib-webview-for-telegram-desktop)
(cmake-helpers-for-telegram-desktop): Bump to submodule checkout.
(rlottie-for-telegram-desktop): Bump to submodule checkout.
[snippet]: Switch off werror.
[arguments]: Inherit from rlottie.
(telegram-desktop): Update to 4.2.2.
[patches]: Add telegram-desktop-allow-disable-libtgvoip.patch.
[arguments]<#:configure-flags>: Unbundle rlottie.
<#:phases>: Adjusted accordingly.
[native-inputs]: Add clang-toolchain.
Remove cmake-shared, extra-cmake-modules and qttools-5.
[inputs]: Add abseil-cpp-cxxstd17, kcoreaddons, libdispatch, libvpx, wayland,
webkitgtk.
Remove catch2, kwayland, libdbusmenu-qt, libtgvoip-for-telegram-desktop,
libx11, materialdecoration and qt5ct.
[propagated-inputs]: Remove dconf.
[license]: Adjust accordingly.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: Add libdispatch.

* gnu/packages/c.scm (libdispatch): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: Remove libvpx-for-telegram-desktop.

* gnu/packages/telegram.scm (libvpx-for-telegram-desktop): Remove variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: webrtc-for-telegram-desktop: Sort inputs alphabetically.

* gnu/packages/telegram.scm (webrtc-for-telegram-desktop)[inputs]: Sort
inputs alphabetically.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: webrtc-for-telegram-desktop: Update to 621f3da5.

* gnu/packages/patches/webrtc-for-telegram-desktop-fix-gcc12-cstdint.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Register it here.
* gnu/packages/telegram.scm (webrtc-for-telegram-desktop): Update to 621f3da5.
[patches]: Add webrtc-for-telegram-desktop-fix-gcc12-cstdint.patch.
[snippet]: Unbundle libvpx and openh264.
[native-inputs]: Remove perl.
[inputs]: Replace pipewire with pipewire-0.3.
Add abseil-cpp-cxxstd17, libdrm, libglvnd, libvpx, libxfixes, mesa, openh264.
Remove alsa-lib, libx11 and pulseaudio.
[arguments]<#:phases>: Adjust accordingly.
[license]: Likewise.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: Add crc32c.

* gnu/packages/cpp.scm (crc32c): New variable.
* gnu/packages/patches/crc32c-unbundle-googletest.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it here.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: Add abseil-cpp-cxxstd17.

* gnu/packages/cpp.scm (abseil-cpp-cxxstd17): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: kcoreaddons: Update to 5.98.0.

* gnu/packages/kde-frameworks.scm (kcoreaddons): Update to 5.98.0.
[arguments]<#:phases>: Update blocklist for failing tests.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: kcoreaddons: Remove trailing #t.

* gnu/packages/kde-frameworks.scm (kcoreaddons)[arguments]<#:phases>: Remove
trailing #t.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: extra-cmake-modules: Update to 5.98.0.

* gnu/packages/kde-frameworks.scm (extra-cmake-modules): Update to 5.98.0.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>

gnu: zplugins: Update to 0.2.4

* gnu/packages/music (zplugins): Update to 0.2.4

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: gnome: Remove input labels.

* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Remove labels.

gnu: gnome: Update propagated dependencies.

* gnu/packages/gnome.scm (gnome)
[propgated-inputs]: Remove gnome-terminal and gedit.  And add
gnome-console and gnome-text-editor.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

doc: Mention where one can learn more about the samba config file syntax.

* doc/guix.texi (Samba Services): Refer users to "man smb.conf" to learn more
about the Samba config file format.

doc: Add a simple Samba share example.

* doc/guix.texi (Samba Services): Add a configuration example.

doc: Clarify Samba Services configuration.

* doc/guix.texi (Samba Services): Explicit the fact that no daemons are
automatically run.  Remove the word "Manually", that suggested otherwise.

services: samba: Remove unused variables and modules.

* gnu/services/samba.scm (%smb-conf): Delete unused variable.

gnu: ffmpeg-5: Update to 5.1.2.

* gnu/packages/video.scm (ffmpeg-5): Update to 5.1.2.

gnu: parallel: Update to 20220922.

* gnu/packages/parallel.scm (parallel): Update to 20220922.

gnu: git-annex: Update to 10.20220927.

* gnu/packages/haskell-apps.scm (git-annex): Update to 10.20220927.
[inputs]: Add ghc-clientsession, ghc-wai, ghc-wai-extra, ghc-warp,
ghc-warp-tls, ghc-yesod, ghc-yesod-core, ghc-yesod-form, and
ghc-yesod-static.

gnu: vim: Update to 9.0.0594.

* gnu/packages/vim.scm (vim): Update to 9.0.0594.
[arguments]: Adjust custom 'patch-absolute-paths phase to add another
file to patch.

Revert "gnu: Add rust-number-prefix-0.4."

This reverts commit 3ff582b82b047f709b761ccf075809c66fef7957.

This package was already included in Guix.

gnu: exa: Only build with pandoc when supported.

* gnu/packages/rust-apps.scm (exa)[arguments]: Adjust custom
'build-manual phase to only build when pandoc is available. Adjust
custom 'install-extras to only install man pages when they are
available.
[native-inputs]: Only include pandoc on systems where it is supported.

gnu: exa: Don't install source.

* gnu/packages/rust-apps.scm (exa)[arguments]: Add flag to not install
the package source.

gnu: exa: Update to 0.10.1.

* gnu/packages/rust-apps.scm (exa): Update to 0.10.1.
[arguments]: Delete custom phase 'disable-failing-tests. Add custom
'build-manual phase. Remove trailing #t from phases.
[cargo-inputs]: Replace rust-datetime-0.4 with 0.5, rust-git2-0.9 with
0.13, rust-number-prefix-0.3 with 0.4, rust-users-0.9 with 0.11,
rust-zoneinfo-compiled-0.4 with 0.5.
[cargo-native-inputs]: Replace rust-datetime-0.4 with 0.5.
[native-inputs]: Add pandoc.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-zoneinfo-compiled-0.5.

* gnu/packages/crates-io.scm (rust-zoneinfo-compiled-0.5): New variable.
(rust-zoneinfo-compiled-0.4): Inherit from rust-zoneinfo-compiled-0.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-datetime-0.5.

* gnu/packages/crates-io.scm (rust-datetime-0.5): New variable.
(rust-datetime-0.4): Inherit from rust-datetime-0.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-iso8601-0.3.

* gnu/packages/crates-io.scm (rust-iso8601-0.3): New variable.
(rust-iso8601-0.1): Inherit from rust-iso8601-0.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-number-prefix-0.4.

* gnu/packages/crates-io.scm (rust-number-prefix-0.4): New variable.
(rust-number-prefix-0.3): Inherit from rust-number-prefix-0.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add qspectrumanalyzer.

* gnu/packages/radio.scm (qspectrumanalyzer): New variable.

gnu: Add python-qt.py.

* gnu/packages/qt.scm (python-qt.py): New variable.

gnu: Add soapy-power.

* gnu/packages/radio.scm (soapy-power): New variable.

gnu: Add python-simplespectral.

* gnu/packages/python-science.scm (python-simplespectral): New variable.

gnu: Add python-simplesoapy.

* gnu/packages/radio.scm (python-simplesoapy): New variable.

Update NEWS.

* NEWS: Add new services for the 1.4.0.

teams: Add Simon Tournier.

* etc/teams.scm.in: Add Simon Tournier.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>

etc: teams: Add (.

* etc/teams.scm.in: Add (.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>

etc: teams: Add more scopes to teams.

* etc/teams.scm.in (r, julia, ruby, go, rust, kernel, translations,
  home, mozilla, racket): Add scopes.
(emacs)[scope]: Add ``guix import elpa''-related files.
(installer)[scope]: Correct ``guix/installer'' to ``gnu/installer''.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>

news: Add 'pt' translation.

* etc/news.scm: Add Portuguese translation of entries about WSL system images
and about Guix System image API documentation.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>

gnu: swaylock-effects: Update to 1.6.10, use G-expressions.

* gnu/packages/wm.scm (swaylock-effects): Update to 1.6.10.
[source]: Switch from commit to release tag.
[arguments]: Use G-expressions.
[home-page]: Switch to maintained fork.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: font-lxgw-wenkai: Update to 1.245.1.

* gnu/packages/fonts (font-lxgw-wenkai): Update to 1.245.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: font-lxgw-wenkai-tc: Update to 0.922.1.

* gnu/packages/fonts (font-lxgw-wenkai-tc): Update to 0.922.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: python-pyvips: Update to 2.2.1.

* gnu/packages/python-xyz.scm (python-pyvips): Update to 2.2.1.

gnu: vips: Update to 8.13.1.

* gnu/packages/image-processing.scm (vips): Update to 8.13.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

Merge branch 'master' into staging

Re-instate "gnu: samba: Fix corrupted man pages."

This reverts commit 968ec0a87, which was itself a revert of 62048ff9fc.

gnu: samba/fixed: Do not inherit native-inputs.

* gnu/packages/samba.scm (samba/fixed): Add a FIXME comment.
[native-inputs]: Copy the complete native inputs from samba, to protect against
unintended changes in the inherited package.

Revert "gnu: samba: Fix corrupted man pages."

This reverts commit 62048ff9fcfbe3fc790a7207fc5f6f3e0476a02a.  This caused a
half world rebuild (9K packages).

Merge branch 'master' into staging.

With resolved conflicts in:
gnu/local.mk
gnu/packages/crates-io.scm

gnu: samba: Fix corrupted man pages.

* gnu/packages/samba.scm (samba) [native-inputs]: Replace docbook-xsl with
docbook-xsl-next.

gnu: Add docbook-xsl-next.

* gnu/packages/docbook.scm (docbook-xsl-next): New variable.

gnu: emacs-plz: Update to 0.2.1.

* gnu/packages/emacs-xyz.scm (emacs-plz): Update to 0.2.1.

gnu: emacs-tuareg: Improve package style.

* gnu/packages/ocaml.scm (emacs-tuareg)[arguments]<#:imported-modules,
<#:phases>: Use G-expressions.  Remove trailing #T at the end of phases.  Use
ELPA-DIRECTORY function.
[native-inputs]: Remove input labels.

gnu: emacs-tuareg: Update to 3.0.0.

* gnu/packages/ocaml.scm (emacs-tuareg): Update to 3.0.0.

gnu: emacs-pyim: Update to 5.2.5.

* gnu/packages/emacs-xyz.scm (emacs-pyim): Update to 5.2.5.

gnu: colord: Update to 1.4.6.

* gnu/packages/gnome.scm (colord): Update to 1.4.6.
[source]: Override inherited field.
[configure-flags]: Use gexps.
[phases]: Likewise.
[native-inputs]: Remove labels.

gnu: docbook-xsl-ns: Rename to docbook-xsl-1.79.1 and use gexps.

* gnu/packages/docbook.scm (docbook-xsl-ns): Rename to...
(docbook-xsl-1.79.1): ... this.
[source]: Adjust URL and add a comment.
[arguments]: Use gexps and adjust phases accordingly.
* gnu/packages/gnome.scm (colord)[native-inputs]: Replace docbook-xsl-ns with
docbook-xsl-1.79.1.

gnu: openjdk: Update to 18.

* gnu/packages/java.scm (openjdk): Update to 18.
(openjdk18): New variable.

gnu: openjdk17: Define with make-openjdk.

* gnu/packages/java.scm (openjdk17): Define with make-openjdk.
[phases]: Use gexps.

gnu: openjdk16: Define with make-openjdk.

* gnu/packages/java.scm (openjdk16): Define with make-openjdk.

gnu: openjdk15: Define with make-openjdk.

* gnu/packages/java.scm (openjdk15): Define with make-openjdk.
[source]: Clear snippet and modules fields.
[native-inputs]: Rewrite using modify-inputs.

gnu: openjdk14: Define with make-openjdk.

* gnu/packages/java.scm (openjdk14): Define with make-openjdk.
[source]: Remove trailing #t from snippet field and improve regexp.

gnu: openjdk13: Define with make-openjdk.

* gnu/packages/java.scm (openjdk13): Define with make-openjdk.

gnu: openjdk12: Introduce 'make-openjdk' syntax and use it.

* gnu/packages/java.scm (make-openjdk): New syntax.
(openjdk12): Use it to define package.
[source]: Remove trailing #t from snippet field and improve regexp.
[phases]: Use gexps.

gnu: opendjk11: Reduce size by removing extraneous files.

By removing the *.diz and src.zip files, the size of the main output of
OpenJDK 11 is reduced from 345 MiB to 116 MiB for OpenJDK 11, while the 'jdk'
output is reduced from 805 MiB to 353 MiB.

* gnu/packages/java.scm (openjdk11)[modules]: New field.
[phases]{remove-diz-files}: New phase.
{strip-character-data-timestamps}: Order after remove-diz-files.

gnu: opendjk11: Improve regular expressions.

* gnu/packages/java.scm (openjdk11)
[phases]{strip-archive-timestamps}: Replace '.*.' with '\\.' in regexps.