;;; Copyright © 2015, 2017, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
-;;; Copyright © 2016, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2016, 2019, 2020, 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016, 2018, 2019, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 Nikita <nikita@n0.is>
-;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2019, 2022 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
(define-module (gnu packages serialization)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
+ #:use-module (guix gexp)
#:use-module (guix download)
#:use-module (guix hg-download)
#:use-module (guix git-download)
(add-after 'unpack 'chdir
(lambda _ (chdir "lang/c++"))))))
(inputs
- `(("boost" ,boost)
- ("snappy" ,snappy)))
+ (list boost snappy))
(home-page "https://avro.apache.org/")
(synopsis "Data serialization system")
(description "Apache Avro is a data serialization system. Avro provides:
(define-public cereal
(package
(name "cereal")
- (version "1.3.0")
+ (version "1.3.2")
(source
(origin
(method git-fetch)
(file-name (git-file-name name version))
(sha256
(base32
- "0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))))
+ "02sd90ynya7wg013zwzjr79fsv4bzqgfg9l2mapd4j38rv06gahx"))))
(build-system cmake-build-system)
(arguments
- `(#:configure-flags '("-DSKIP_PORTABILITY_TEST=ON")
- #:phases
- (modify-phases %standard-phases
- (add-before 'configure 'skip-sandbox
- (lambda _
- (substitute* "CMakeLists.txt"
- (("add_subdirectory\\(sandbox\\)") ""))))
- (add-after 'install 'install-doc
- (lambda _
- (let ((doc (string-append %output "/share/doc/html")))
- (invoke "make" "doc")
- (mkdir-p doc)
- (copy-recursively "doc/html" doc)))))))
+ (list
+ #:configure-flags #~'("-DSKIP_PORTABILITY_TEST=ON"
+ ;; Don't bother building the sandbox examples.
+ "-DSKIP_PERFORMANCE_COMPARISON=ON"
+ "-DBUILD_SANDBOX=OFF")
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'install 'install-doc
+ (lambda _
+ (let ((doc (string-append #$output "/share/doc/html")))
+ (invoke "make" "doc")
+ (mkdir-p doc)
+ (copy-recursively "doc/html" doc)))))))
(native-inputs
- `(("doxygen" ,doxygen)))
+ (list doxygen))
(home-page "https://uscilab.github.io/cereal/")
(synopsis "C++11 library for serialization")
(description
"Cereal is a header-only C++11 serialization library. Cereal takes
arbitrary data types and reversibly turns them into different representations,
such as compact binary encodings, XML, or JSON.")
- (license license:bsd-3)))
+ ;; Note: Cereal bundles forked versions of rapidxml and rapidjson
+ ;; (see include/cereal/external/), so list their licenses too.
+ (license (list license:bsd-3 ;Cereal itself
+ ;; The bundled RapidXML is dual Boost/Expat (users choice).
+ ;; RapidJSON is Expat licensed, and further bundles a
+ ;; stdint.h with BSD-3.
+ license:boost1.0 license:expat
+ ;; Finally, include/cereal/external/base64.hpp has a
+ ;; home-grown BSD-like license.
+ (license:non-copyleft
+ "file://include/cereal/external/LICENSE")))))
+
+;; Some packages fail with the latest version. Remove this variable
+;; when unused.
+(define-public cereal-1.3.0
+ (package
+ (inherit cereal)
+ (version "1.3.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/USCiLab/cereal")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name "cereal" version))
+ (sha256
+ (base32
+ "0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))))
+ (arguments
+ (substitute-keyword-arguments (package-arguments cereal)
+ ((#:configure-flags flags #~'())
+ #~'("-DSKIP_PORTABILITY_TEST=ON"))
+ ((#:phases phases #~%standard-phases)
+ #~(modify-phases #$phases
+ (add-before 'configure 'skip-sandbox
+ (lambda _
+ (substitute* "CMakeLists.txt"
+ (("add_subdirectory\\(sandbox\\)") ""))))))))))
(define-public msgpack
(package
(base32 "0yzhq50ijvwrfkr97knhvn54lj3f4hr3zy39yq8wpf6xll94s4bf"))))
(build-system cmake-build-system)
(native-inputs
- `(("googletest" ,googletest-1.8)
- ("pkg-config" ,pkg-config)))
+ (list googletest-1.8 pkg-config))
(propagated-inputs
- `(("zlib" ,zlib))) ;; Msgpack installs two headers (zbuffer.h,
+ (list zlib)) ;; Msgpack installs two headers (zbuffer.h,
;; zbuffer.hpp) which #include <zlib.h>. However, 'guix gc --references'
;; does not detect a store reference to zlib since these headers are not
;; compiled.
(modify-phases %standard-phases
(delete 'configure))))
(native-inputs
- `(("libtool" ,libtool)))
+ (list libtool))
(home-page "https://github.com/tarruda/libmpack")
(synopsis "Small binary serialization library")
(description "Libmpack is a small binary serialization and RPC library
"mpack-src")
#t)))))
(inputs
- `(("lua" ,lua)))
+ (list lua))
(native-inputs
`(("pkg-config" ,pkg-config)
("libmpack" ,(package-source libmpack))))
(define-public libcyaml
(package
(name "libcyaml")
- (version "1.1.0")
+ (version "1.3.1")
(source
(origin
(method git-fetch)
(file-name (git-file-name name version))
(patches (search-patches "libcyaml-libyaml-compat.patch"))
(sha256
- (base32 "0428p0rwq71nhh5nzcbapsbrjxa0x5l6h6ns32nxv7j624f0zd93"))))
+ (base32 "0gvf3h8r8300wdwfjgxw3nzlj7w14q63m67p8wdm5fvpha017n4y"))))
(build-system gnu-build-system)
(arguments
- `(#:make-flags
+ `(#:test-target "test"
+ #:make-flags
(list (string-append "PREFIX=" (assoc-ref %outputs "out"))
- (string-append "CC=gcc"))
+ (string-append "CC=" ,(cc-for-target)))
#:phases
(modify-phases %standard-phases
- (delete 'configure) ; no configure script
- (replace 'check
- (lambda _
- (setenv "CC" "gcc")
- (invoke "make" "test"))))))
+ (delete 'configure)))) ; no configure script
(inputs
- `(("libyaml" ,libyaml)))
+ (list libyaml))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(synopsis "C library for reading and writing YAML")
(description
"LibCYAML is a C library written in ISO C11 for reading and writing
(arguments
'(#:configure-flags '("-DYAML_BUILD_SHARED_LIBS=ON")))
(native-inputs
- `(("python" ,python)))
+ (list python))
(home-page "https://github.com/jbeder/yaml-cpp")
(synopsis "YAML parser and emitter in C++")
(description "YAML parser and emitter in C++ matching the YAML 1.2 spec.")
(method git-fetch)
(uri (git-reference (url home-page) (commit version)))
(file-name (git-file-name name version))
+ (patches
+ (search-patches "jsoncpp-pkg-config-version.patch"))
(sha256
(base32
"0qnx5y6c90fphl9mj9d20j2dfgy6s5yr5l0xnzid0vh71zrp6jwv"))))
it a convenient format to store user input files.")
(license license:expat)))
-;; XXX: TODO(core-updates): Remove this package and apply the patch to the
-;; jsoncpp package. This patch fixes the package version declared in the
-;; pkg-config file.
-(define-public jsoncpp-with-pkg-version
- (package
- (inherit jsoncpp)
- (name "jsoncpp")
- (version "1.9.4")
- (home-page "https://github.com/open-source-parsers/jsoncpp")
- (source (origin
- (method git-fetch)
- (uri (git-reference (url home-page) (commit version)))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "0qnx5y6c90fphl9mj9d20j2dfgy6s5yr5l0xnzid0vh71zrp6jwv"))
- (patches
- (search-patches "jsoncpp-pkg-config-version.patch"))))))
-
;; Tensorflow does not build with jsoncpp 1.8.x. It is built with commit
;; 4356d9bba191e1e16ce7a92073cbf3e63564e973, which lies between version 1.7.2
;; and 1.7.3.
":"))))
#t)))))
(inputs
- `(("bash-minimal" ,bash-minimal)
- ("grep" ,grep)
- ("sed" ,sed)))
+ (list bash-minimal grep sed))
(synopsis "Pipeable JSON parser written in shell")
(description
"This package provides a JSON parser written in shell, compatible with
(base32
"1fj4554msq0rrz14snbj908dzqj46gh7jg9w9j0akn2b7q911m5a"))))
(build-system gnu-build-system)
- (native-inputs `(("perl" ,perl)))
+ (native-inputs (list perl))
(home-page "http://mongoc.org/libbson/current/index.html")
(synopsis "C BSON library")
(description "Libbson can create and parse BSON documents. It can also
"0hm9yg785f46bkrgqknd6fdvmkby9dpzjnm0b63qf0i748acaj5v"))))
(build-system python-build-system)
(native-inputs
- `(("python-pytest" ,python-pytest)))
+ (list python-pytest))
(propagated-inputs
- `(("python-ruamel.yaml.clib" ,python-ruamel.yaml.clib)))
+ (list python-ruamel.yaml.clib))
(arguments
`(;; TODO: Tests require packaging "ruamel.std.pathlib".
#:tests? #f))
(lambda _
(invoke "cython" "_ruamel_yaml.pyx"))))))
(native-inputs
- `(("python-cython" ,python-cython)))
+ (list python-cython))
(home-page "https://sourceforge.net/p/ruamel-yaml-clib/code/ci/default/tree")
(synopsis "C version of reader, parser and emitter for ruamel.yaml")
(description
"00w9hwz7sj3fkdjc378r066vdy6lpxmn6vfac3qx956k8lvpxxj5"))))
(build-system python-build-system)
(propagated-inputs
- `(("python-pandas" ,python-pandas)
- ("python-pyarrow" ,python-pyarrow)))
+ (list python-pandas python-pyarrow))
(home-page "https://github.com/wesm/feather")
(synopsis "Python wrapper to the Feather file format")
(description "This package provides a Python wrapper library to the
HCoop / jackhill / guix / guix.git / blobdiff