| 1 | ;;; GNU Guix --- Functional package management for GNU |
| 2 | ;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> |
| 3 | ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> |
| 4 | ;;; |
| 5 | ;;; This file is part of GNU Guix. |
| 6 | ;;; |
| 7 | ;;; GNU Guix is free software; you can redistribute it and/or modify it |
| 8 | ;;; under the terms of the GNU General Public License as published by |
| 9 | ;;; the Free Software Foundation; either version 3 of the License, or (at |
| 10 | ;;; your option) any later version. |
| 11 | ;;; |
| 12 | ;;; GNU Guix is distributed in the hope that it will be useful, but |
| 13 | ;;; WITHOUT ANY WARRANTY; without even the implied warranty of |
| 14 | ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
| 15 | ;;; GNU General Public License for more details. |
| 16 | ;;; |
| 17 | ;;; You should have received a copy of the GNU General Public License |
| 18 | ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. |
| 19 | |
| 20 | (define-module (test-cran) |
| 21 | #:use-module (gnu packages statistics) |
| 22 | #:use-module (guix import cran) |
| 23 | #:use-module (guix tests) |
| 24 | #:use-module (srfi srfi-1) |
| 25 | #:use-module (srfi srfi-64) |
| 26 | #:use-module (srfi srfi-26) |
| 27 | #:use-module (ice-9 match)) |
| 28 | |
| 29 | (define description " |
| 30 | Package: My-Example |
| 31 | Type: Package |
| 32 | Title: Example package |
| 33 | Version: 1.2.3 |
| 34 | Date: 2015-12-10 |
| 35 | Author: Ricardo Wurmus |
| 36 | Maintainer: Guix Schmeeks <guix@gnu.org> |
| 37 | URL: http://gnu.org/s/my-example |
| 38 | Description: This is a long description |
| 39 | spanning multiple lines: and it could confuse the parser that |
| 40 | there is a colon : on the lines. |
| 41 | And: this line continues the description. |
| 42 | biocViews: 0 |
| 43 | SystemRequirements: Cairo (>= 0) |
| 44 | Depends: A C++11 compiler. Version 4.6.* of g++ (as |
| 45 | currently in Rtools) is insufficient; versions 4.8.*, 4.9.* or |
| 46 | later will be fine. |
| 47 | License: GPL (>= 3) |
| 48 | Imports: Rcpp (>= 0.11.5), proto, Scales |
| 49 | LinkingTo: Rcpp, BH |
| 50 | NeedsCompilation: yes |
| 51 | Repository: CRAN |
| 52 | Date/Publication: 2015-07-14 14:15:16 |
| 53 | ") |
| 54 | |
| 55 | (define description-alist |
| 56 | (description->alist description)) |
| 57 | |
| 58 | (define simple-alist |
| 59 | '(("Key" . "Value") |
| 60 | ("SimpleList" . "R, Rcpp, something, whatever") |
| 61 | ("BadList" . "This is not a real list, you know?") |
| 62 | ("List" . "R (>= 2.2), BH (for no reason), GenomicRanges"))) |
| 63 | |
| 64 | (test-begin "cran") |
| 65 | |
| 66 | (test-assert "description->alist: contains all valid keys" |
| 67 | (let ((keys '("Package" "Type" "Title" "Version" "Date" |
| 68 | "Author" "Maintainer" "URL" "Description" |
| 69 | "SystemRequirements" "Depends" "License" |
| 70 | "Imports" "biocViews" "LinkingTo" |
| 71 | "NeedsCompilation" "Repository" |
| 72 | "Date/Publication"))) |
| 73 | (lset= string=? keys (map car description-alist)))) |
| 74 | |
| 75 | (test-equal "listifyx: return empty list if key cannot be found" |
| 76 | '() |
| 77 | ((@@ (guix import cran) listify) simple-alist "Letters")) |
| 78 | |
| 79 | (test-equal "listify: split comma-separated value into elements" |
| 80 | '("R" "Rcpp" "something" "whatever") |
| 81 | ((@@ (guix import cran) listify) simple-alist "SimpleList")) |
| 82 | |
| 83 | (test-equal "listify: strip off parentheses" |
| 84 | '("R" "BH" "GenomicRanges") |
| 85 | ((@@ (guix import cran) listify) simple-alist "List")) |
| 86 | |
| 87 | (test-equal "listify: ignore values that are no lists" |
| 88 | '() |
| 89 | ((@@ (guix import cran) listify) simple-alist "BadList")) |
| 90 | |
| 91 | (test-equal "r-mininal is not a cran package" |
| 92 | #f |
| 93 | ((@@ (guix import cran) cran-package?) r-minimal)) |
| 94 | |
| 95 | (test-assert "description->package" |
| 96 | ;; Replace network resources with sample data. |
| 97 | (mock ((guix build download) url-fetch |
| 98 | (lambda* (url file-name |
| 99 | #:key |
| 100 | (mirrors '()) verify-certificate?) |
| 101 | (with-output-to-file file-name |
| 102 | (lambda () |
| 103 | (display |
| 104 | (match url |
| 105 | ("mirror://cran/src/contrib/My-Example_1.2.3.tar.gz" |
| 106 | "source") |
| 107 | (_ (error "Unexpected URL: " url)))))))) |
| 108 | (match (description->package 'cran description-alist) |
| 109 | (('package |
| 110 | ('name "r-my-example") |
| 111 | ('version "1.2.3") |
| 112 | ('source ('origin |
| 113 | ('method 'url-fetch) |
| 114 | ('uri ('cran-uri "My-Example" 'version)) |
| 115 | ('sha256 |
| 116 | ('base32 |
| 117 | (? string? hash))))) |
| 118 | ('properties ('quasiquote (('upstream-name . "My-Example")))) |
| 119 | ('build-system 'r-build-system) |
| 120 | ('inputs |
| 121 | ('quasiquote |
| 122 | (("cairo" ('unquote 'cairo))))) |
| 123 | ('propagated-inputs |
| 124 | ('quasiquote |
| 125 | (("r-bh" ('unquote 'r-bh)) |
| 126 | ("r-proto" ('unquote 'r-proto)) |
| 127 | ("r-rcpp" ('unquote 'r-rcpp)) |
| 128 | ("r-scales" ('unquote 'r-scales))))) |
| 129 | ('home-page "http://gnu.org/s/my-example") |
| 130 | ('synopsis "Example package") |
| 131 | ('description |
| 132 | "This is a long description spanning multiple lines: \ |
| 133 | and it could confuse the parser that there is a colon : on the \ |
| 134 | lines. And: this line continues the description.") |
| 135 | ('license 'gpl3+)) |
| 136 | #t) |
| 137 | (x |
| 138 | (begin |
| 139 | (format #t "~s\n" x) |
| 140 | (pk 'fail x #f)))))) |
| 141 | |
| 142 | (test-end "cran") |